RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 SEPT10Q9P0V9 454 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 COL20A1Q9P218 1284 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 ZNRF3Q9ULT6 936 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 NRAPQ86VF7 1730 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 ZNF536O15090 1300 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 STRNO43815 780 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 IL1BP01584 269 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 ACO1P21399 889 aaKnown RBP9.74□□□□□ -0.85
BDNF-216ENST00000532997 SPP2Q13103 211 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 R3HDM1Q15032 1099 aaKnown RBP9.74□□□□□ -0.85
BDNF-216ENST00000532997 CHADLQ6NUI6 762 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 MTHFD1LQ6UB35 978 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 RNF149Q8NC42 400 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 ZBTB45Q96K62 511 aaPredicted RBP9.74□□□□□ -0.85
BDNF-216ENST00000532997 LHX5Q9H2C1 402 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 EURLQ9NYK6 297 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 FAF1Q9UNN5 650 aaPredicted RBP9.74□□□□□ -0.85
BDNF-216ENST00000532997 SSX2IPQ9Y2D8 614 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 E7ESA3 106 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 H2AFYO75367 372 aaKnown RBP9.74□□□□□ -0.85
BDNF-216ENST00000532997 TGFB2P61812 414 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 ESRRGP62508 458 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 PTPN11Q06124 597 aaPredicted RBP9.74□□□□□ -0.85
BDNF-216ENST00000532997 MTMR2Q13614 643 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 NOMO1Q15155 1222 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 OR5B17Q8NGF7 314 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 B4GALNT2Q8NHY0 566 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 GDPD5Q8WTR4 605 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 ZNF516Q92618 1163 aa9.74□□□□□ -0.85
BDNF-216ENST00000532997 PTCD3Q96EY7 689 aaKnown RBP9.74□□□□□ -0.85
BDNF-216ENST00000532997 DHX35Q9H5Z1 703 aaKnown RBP9.74□□□□□ -0.85
BDNF-216ENST00000532997 APOBEC3GQ9HC16 384 aaKnown RBP9.74□□□□□ -0.85
BDNF-216ENST00000532997 FARP1Q9Y4F1 1045 aaPredicted RBP9.74□□□□□ -0.85
BDNF-216ENST00000532997 COL2A1P02458 1487 aaPredicted RBP9.73□□□□□ -0.85
BDNF-216ENST00000532997 TRUB2O95900 331 aaKnown RBP9.73□□□□□ -0.85
BDNF-216ENST00000532997 BPGMP07738 259 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 SPRP35270 261 aaPredicted RBP9.73□□□□□ -0.85
BDNF-216ENST00000532997 SLC1A6P48664 564 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 ACTR3P61158 418 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 FAXCQ5TGI0 409 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 PDPK2PQ6A1A2 396 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 SLC39A4Q6P5W5 647 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 C15orf39Q6ZRI6 1047 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 RAPH1Q70E73 1250 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 AMIGO3Q86WK7 504 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 TRIML2Q8N7C3 387 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 CCNYQ8ND76 341 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 UCMAQ8WVF2 138 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 CLEC4DQ8WXI8 215 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 LZICQ8WZA0 190 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 ATG4CQ96DT6 458 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 NLRP4Q96MN2 994 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 C10orf88Q9H8K7 445 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 HOXC10Q9NYD6 342 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 XIRP1Q702N8 1843 aaKnown RBP9.73□□□□□ -0.85
BDNF-216ENST00000532997 WNK3Q9BYP7 1800 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 CFLARO15519 480 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 LRCH4O75427 683 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 RTN3O95197 1032 aaPredicted RBP9.73□□□□□ -0.85
BDNF-216ENST00000532997 THRAP10827 490 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 RGS2P41220 211 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 CDK7P50613 346 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 NEK3P51956 506 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 SLC12A2P55011 1212 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 LIN52Q52LA3 116 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 SEZ6Q53EL9 994 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 TMCO4Q5TGY1 634 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 KRT80Q6KB66 452 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 DENND1BQ6P3S1 775 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 CCDC60Q8IWA6 550 aaPredicted RBP9.73□□□□□ -0.85
BDNF-216ENST00000532997 HACE1Q8IYU2 909 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 DNAAF3Q8N9W5 541 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 IRAK4Q9NWZ3 460 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 BFARQ9NZS9 450 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 HBS1LQ9Y450 684 aaKnown RBP9.73□□□□□ -0.85
BDNF-216ENST00000532997 VNN1O95497 513 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 PIGRP01833 764 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 CRHR1P34998 444 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 PHKA2P46019 1235 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 TEDDM1Q5T9Z0 273 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 FAM91A1Q658Y4 838 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 KRT27Q7Z3Y8 459 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 RXFP2Q8WXD0 754 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 MAML3Q96JK9 1138 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 ZFRQ96KR1 1074 aaKnown RBP9.73□□□□□ -0.85
BDNF-216ENST00000532997 NUF2Q9BZD4 464 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 S100A14Q9HCY8 104 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 ETNK2Q9NVF9 386 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 ITGA11Q9UKX5 1188 aa9.73□□□□□ -0.85
BDNF-216ENST00000532997 ZNF831Q5JPB2 1677 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 SDR42E2A6NKP2 422 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 TRPA1O75762 1119 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 TMEM63AO94886 807 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 APOA4P06727 396 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 RALBP11234 206 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 RPL10AP62906 217 aaKnown RBP9.72□□□□□ -0.85
BDNF-216ENST00000532997 TBL3Q12788 808 aaKnown RBP9.72□□□□□ -0.85
BDNF-216ENST00000532997 CYLC2Q14093 348 aaPredicted RBP9.72□□□□□ -0.85
BDNF-216ENST00000532997 ATF7IP2Q5U623 682 aa9.72□□□□□ -0.85
BDNF-216ENST00000532997 ZFP1Q6P2D0 407 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms