RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 MAN2B1O00754 1011 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 ARSAP15289 507 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 JAM2P57087 298 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 DAOAP59103 153 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 EML3Q32P44 896 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 ZNF852Q6ZMS4 543 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 TMEM110Q86TL2 294 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 ADGRG2Q8IZP9 1017 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 ZNF687Q8N1G0 1237 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 WBP2Q969T9 261 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 NELL2Q99435 816 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 FOXQ1Q9C009 403 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 NACA2Q9H009 215 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 DNMT3LQ9UJW3 386 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 SIT1Q9Y3P8 196 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 WNT6Q9Y6F9 365 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 ZNF318Q5VUA4 2279 aa20.85■□□□□ 0.93
CPSF1-209ENST00000532725 COL4A3Q01955 1670 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 A0A1B0GTH6 734 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 E2F8A0AVK6 867 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 MDM4O15151 490 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 CYP11B1P15538 503 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 SOX9P48436 509 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 KPNA1P52294 538 aaPredicted RBP20.84■□□□□ 0.93
CPSF1-209ENST00000532725 FZD5Q13467 585 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 C10orf120Q5SQS8 335 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 BSPRYQ5W0U4 402 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 TADA2BQ86TJ2 420 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 SCUBE3Q8IX30 993 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 IRGQQ8WZA9 623 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 DDX1Q92499 740 aaKnown RBP20.84■□□□□ 0.93
CPSF1-209ENST00000532725 PCMTD1Q96MG8 357 aaPredicted RBP20.84■□□□□ 0.93
CPSF1-209ENST00000532725 CDK5RAP1Q96SZ6 601 aaKnown RBP20.84■□□□□ 0.93
CPSF1-209ENST00000532725 OSBPL6Q9BZF3 934 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 LTB4R2Q9NPC1 389 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 NLRC4Q9NPP4 1024 aa20.84■□□□□ 0.93
CPSF1-209ENST00000532725 TICRRQ7Z2Z1 1910 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 FAM170BA6NMN3 283 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 SPECC1L-ADORA2AF8WAN1 911 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 GREM1O60565 184 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 FBXO21O94952 628 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 KRT9P35527 623 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 ACADSBP45954 432 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 IFNAR2P48551 515 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 NR1I3Q14994 352 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 FILIP1LQ4L180 1135 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 BTBD8Q5XKL5 378 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 RALGPS2Q86X27 583 aaPredicted RBP20.83■□□□□ 0.93
CPSF1-209ENST00000532725 PJA1Q8NG27 643 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 NEK11Q8NG66 645 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 CLEC4CQ8WTT0 213 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 FAM3CQ92520 227 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 CHFRQ96EP1 664 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 MSANTD3Q96H12 275 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 ECT2Q9H8V3 914 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 ST7Q9NRC1 585 aa20.83■□□□□ 0.93
CPSF1-209ENST00000532725 COL4A2P08572 1712 aa20.83■□□□□ 0.92
CPSF1-209ENST00000532725 KIF26AQ9ULI4 1882 aaPredicted RBP20.83■□□□□ 0.92
CPSF1-209ENST00000532725 SLC9A3R1O14745 358 aaPredicted RBP20.82■□□□□ 0.92
CPSF1-209ENST00000532725 CTHP32929 405 aa20.82■□□□□ 0.92
CPSF1-209ENST00000532725 SOX5P35711 763 aa20.82■□□□□ 0.92
CPSF1-209ENST00000532725 TXNDC11Q6PKC3 985 aa20.82■□□□□ 0.92
CPSF1-209ENST00000532725 HTR3DQ70Z44 454 aa20.82■□□□□ 0.92
CPSF1-209ENST00000532725 ATP2A3Q93084 1043 aa20.82■□□□□ 0.92
CPSF1-209ENST00000532725 MIS12Q9H081 205 aa20.82■□□□□ 0.92
CPSF1-209ENST00000532725 ABCC13Q9NSE7 274 aa20.82■□□□□ 0.92
CPSF1-209ENST00000532725 DLGAP2Q9P1A6 1054 aa20.82■□□□□ 0.92
CPSF1-209ENST00000532725 TBC1D14Q9P2M4 693 aa20.82■□□□□ 0.92
CPSF1-209ENST00000532725 MRPS17Q9Y2R5 130 aaKnown RBP20.82■□□□□ 0.92
CPSF1-209ENST00000532725 MYO16Q9Y6X6 1858 aa20.81■□□□□ 0.92
CPSF1-209ENST00000532725 HELZP42694 1942 aaKnown RBP20.81■□□□□ 0.92
CPSF1-209ENST00000532725 SCAMP3O14828 347 aaKnown RBP20.81■□□□□ 0.92
CPSF1-209ENST00000532725 PAPSS1O43252 624 aaPredicted RBP20.81■□□□□ 0.92
CPSF1-209ENST00000532725 GFPT2O94808 682 aa20.81■□□□□ 0.92
CPSF1-209ENST00000532725 TARSP26639 723 aaKnown RBP20.81■□□□□ 0.92
CPSF1-209ENST00000532725 EFEMP1Q12805 493 aa20.81■□□□□ 0.92
CPSF1-209ENST00000532725 PDCLQ13371 301 aa20.81■□□□□ 0.92
CPSF1-209ENST00000532725 UBXN2BQ14CS0 331 aa20.81■□□□□ 0.92
CPSF1-209ENST00000532725 C1orf228Q6PIY5 440 aa20.81■□□□□ 0.92
CPSF1-209ENST00000532725 LRSAM1Q6UWE0 723 aa20.81■□□□□ 0.92
CPSF1-209ENST00000532725 NOP9Q86U38 636 aaKnown RBP20.81■□□□□ 0.92
CPSF1-209ENST00000532725 PASD1Q8IV76 773 aa20.81■□□□□ 0.92
CPSF1-209ENST00000532725 CCDC105Q8IYK2 499 aa20.81■□□□□ 0.92
CPSF1-209ENST00000532725 EDEM1Q92611 657 aa20.81■□□□□ 0.92
CPSF1-209ENST00000532725 CLDN23Q96B33 292 aa20.81■□□□□ 0.92
CPSF1-209ENST00000532725 SH3BP1Q9Y3L3 701 aa20.81■□□□□ 0.92
CPSF1-209ENST00000532725 A0A1W2PQC6 194 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 E5RJQ4 531 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 SERPINC1P01008 464 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 FYNP06241 537 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 DCNP07585 359 aaKnown RBP20.8■□□□□ 0.92
CPSF1-209ENST00000532725 IRF1P10914 325 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 COL9A1P20849 921 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 CDH5P33151 784 aaPredicted RBP20.8■□□□□ 0.92
CPSF1-209ENST00000532725 GJA4P35212 333 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 STAT1P42224 750 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 TPM4P67936 248 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 COG7P83436 770 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 FANCCQ00597 558 aa20.8■□□□□ 0.92
CPSF1-209ENST00000532725 RHBDF2Q6PJF5 856 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms