RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CEP19Q96LK0 163 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 PNMA5Q96PV4 448 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 C1QTNF7Q9BXJ2 289 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 RIPK3Q9Y572 518 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 OR1E1P30953 314 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 CUL3Q13618 768 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 PLCL1Q15111 1095 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 HECTD3Q5T447 861 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 UGT3A1Q6NUS8 523 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 TPGS1Q6ZTW0 290 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 SPATA21Q7Z572 469 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 ARL8AQ96BM9 186 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 SEMA6BQ9H3T3 888 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 KCNMB3Q9NPA1 279 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 SLC45A1Q9Y2W3 748 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 CYP3A7-CYP3A51PA0A087WV96 503 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 TCP11X1B4DZS4 312 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 NT5C1B-RDH14C9J2C7 533 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 RAMP2O60895 175 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 ATP9AO75110 1047 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 CYP3A7P24462 503 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 YWHAZP63104 245 aaKnown RBP11.67□□□□□ -0.54
PTPRK-221ENST00000532331 STX3Q13277 289 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 ATAT1Q5SQI0 421 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 DENND5BQ6ZUT9 1274 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 CEP68Q76N32 757 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.67□□□□□ -0.54
PTPRK-221ENST00000532331 ARNTL2Q8WYA1 636 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 PRMT1Q99873 361 aaKnown RBP11.67□□□□□ -0.54
PTPRK-221ENST00000532331 AKAP7Q9P0M2 348 aaPredicted RBP11.67□□□□□ -0.54
PTPRK-221ENST00000532331 TEKT2Q9UIF3 430 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 SMIM22K7EJ46 135 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 RAD51CO43502 376 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 RHOBTB1O94844 696 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 PTPN1P18031 435 aaKnown RBP11.67□□□□□ -0.54
PTPRK-221ENST00000532331 KRT4P19013 534 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 FDFT1P37268 417 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 MAGEA4P43358 317 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 PTK7Q13308 1070 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 SHROOM1Q2M3G4 852 aaPredicted RBP11.67□□□□□ -0.54
PTPRK-221ENST00000532331 LRRC8EQ6NSJ5 796 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 RXFP2Q8WXD0 754 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 FRMD8Q9BZ67 464 aaPredicted RBP11.67□□□□□ -0.54
PTPRK-221ENST00000532331 GOLPH3Q9H4A6 298 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 OSGEPL1Q9H4B0 414 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 TASP1Q9H6P5 420 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 CFAP73A6NFT4 308 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 SYCE1LA8MT33 242 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 ANGPT2O15123 496 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 FGF19O95750 216 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 ITGALP20701 1170 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 SERPINB4P48594 390 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 CSE1LP55060 971 aaKnown RBP11.67□□□□□ -0.54
PTPRK-221ENST00000532331 RD3Q7Z3Z2 195 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 CACUL1Q86Y37 369 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 CHORDC1Q9UHD1 332 aaPredicted RBP11.67□□□□□ -0.54
PTPRK-221ENST00000532331 CDH9Q9ULB4 789 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 SNX5Q9Y5X3 404 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 CCDC130P13994 396 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 SLC12A3P55017 1021 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 PTENP60484 403 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 GUCY1A3Q02108 690 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 CAPSQ13938 189 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 C3orf62Q6ZUJ4 267 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 PPIL6Q8IXY8 311 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 SGSM3Q96HU1 749 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 FAM118BQ9BPY3 351 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 ERP44Q9BS26 406 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 GPATCH2LQ9NWQ4 482 aa11.67□□□□□ -0.54
PTPRK-221ENST00000532331 PSTPIP1O43586 416 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 MICAL2O94851 1124 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 IGSF6O95976 241 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 PAEPP09466 180 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 MAGEA9P43362 315 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 SCNN1BP51168 640 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 HIST2H2ACQ16777 129 aaPredicted RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 PHKG1Q16816 387 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 SPDYE7PQ495Y7 208 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 HIST2H2AA3Q6FI13 130 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 TATDN2Q93075 761 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 ROPN1BQ9BZX4 212 aaPredicted RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 ROPN1Q9HAT0 212 aaPredicted RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 ABCC13Q9NSE7 274 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 MARCH2Q9P0N8 246 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 H2AFYO75367 372 aaKnown RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 SNRPAP09012 282 aaKnown RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 MYL2P10916 166 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 PBLDP30039 288 aaPredicted RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 MDH1P40925 334 aaKnown RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 ITGA8P53708 1063 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 MFSD4BQ5TF39 518 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 RRM2BQ7LG56 351 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 OMDQ99983 421 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 TTPALQ9BTX7 342 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 THAP2Q9H0W7 228 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 YY1AP1Q9H869 796 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 PCMTD2Q9NV79 361 aa11.66□□□□□ -0.54
PTPRK-221ENST00000532331 CHCHD3Q9NX63 227 aaKnown RBP11.66□□□□□ -0.54
PTPRK-221ENST00000532331 ARL2BPQ9Y2Y0 163 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms