RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ELSPBP1Q96BH3 223 aa23.36■■□□□ 1.33
LRRK1-208ENST00000532029 FAM149B1Q96BN6 582 aa23.36■■□□□ 1.33
LRRK1-208ENST00000532029 SYT11Q9BT88 431 aa23.36■■□□□ 1.33
LRRK1-208ENST00000532029 TRIM62Q9BVG3 475 aa23.36■■□□□ 1.33
LRRK1-208ENST00000532029 RNF38Q9H0F5 515 aa23.36■■□□□ 1.33
LRRK1-208ENST00000532029 KIF9Q9HAQ2 790 aa23.36■■□□□ 1.33
LRRK1-208ENST00000532029 ABCC13Q9NSE7 274 aa23.36■■□□□ 1.33
LRRK1-208ENST00000532029 ABHD10Q9NUJ1 306 aa23.36■■□□□ 1.33
LRRK1-208ENST00000532029 DOCK8Q8NF50 2099 aa23.36■■□□□ 1.33
LRRK1-208ENST00000532029 DENND4CQ5VZ89 1909 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 VCANP13611 3396 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 PRAMEF12O95522 483 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 ASGR2P07307 311 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 FCARP24071 287 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 CDC25BP30305 580 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 HNRNPH3P31942 346 aaKnown RBP23.35■■□□□ 1.33
LRRK1-208ENST00000532029 GABRB2P47870 512 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 SLC7A9P82251 487 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 CENPCQ03188 943 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 ARID5BQ14865 1188 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 FAM183BPQ6ZVS7 135 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 RNF135Q8IUD6 432 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 ZNF276Q8N554 614 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 SLC30A5Q8TAD4 765 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 RNF139Q8WU17 664 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 RSAD2Q8WXG1 361 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 USP13Q92995 863 aaPredicted RBP23.35■■□□□ 1.33
LRRK1-208ENST00000532029 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.35■■□□□ 1.33
LRRK1-208ENST00000532029 OBP2AQ9NY56 170 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 ARHGAP26Q9UNA1 814 aa23.35■■□□□ 1.33
LRRK1-208ENST00000532029 HEPACAM2A8MVW5 462 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 EFHC1Q5JVL4 640 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 KLHDC10Q6PID8 442 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 MMS22LQ6ZRQ5 1243 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 HFE2Q6ZVN8 426 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 TTC16Q8NEE8 873 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 EDEM1Q92611 657 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 C11orf70Q9BRQ4 267 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 GRPEL1Q9HAV7 217 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 OLA1Q9NTK5 396 aaKnown RBP23.34■■□□□ 1.33
LRRK1-208ENST00000532029 RASAL2Q9UJF2 1139 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 DNMT3LQ9UJW3 386 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 NUDT5Q9UKK9 219 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 CPQQ9Y646 472 aa23.34■■□□□ 1.33
LRRK1-208ENST00000532029 ANAPC1Q9H1A4 1944 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 NUP210Q8TEM1 1887 aaPredicted RBP23.33■■□□□ 1.33
LRRK1-208ENST00000532029 TBX18O95935 607 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 MMP8P22894 467 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 SLC6A3Q01959 620 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 ACAD10Q6JQN1 1059 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.33■■□□□ 1.33
LRRK1-208ENST00000532029 DDX42Q86XP3 938 aaKnown RBP eCLIP23.33■■□□□ 1.33
LRRK1-208ENST00000532029 PHF13Q86YI8 300 aaPredicted RBP23.33■■□□□ 1.33
LRRK1-208ENST00000532029 YAF2Q8IY57 180 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 DEPDC1BQ8WUY9 529 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 CD320Q9NPF0 282 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 ASNSD1Q9NWL6 643 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 SMPD4Q9NXE4 827 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 ADAM22Q9P0K1 906 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 STRIP2Q9ULQ0 834 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 CCL26Q9Y258 94 aa23.33■■□□□ 1.33
LRRK1-208ENST00000532029 DDX3XO00571 662 aaKnown RBP eCLIP23.32■■□□□ 1.32
LRRK1-208ENST00000532029 CAPN9O14815 690 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 HSF2BPO75031 334 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 CALB1P05937 261 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 GLI1P08151 1106 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 NCAM1P13591 858 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 YWHAZP63104 245 aaKnown RBP23.32■■□□□ 1.32
LRRK1-208ENST00000532029 EFEMP1Q12805 493 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 TDGQ13569 410 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 C2CD6Q53TS8 623 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 OLFML1Q6UWY5 402 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 XYLT1Q86Y38 959 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 MFSD6LQ8IWD5 586 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 BPIFB1Q8TDL5 484 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 SH3RF2Q8TEC5 729 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 RSPRY1Q96DX4 576 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 RPP25Q9BUL9 199 aaKnown RBP23.32■■□□□ 1.32
LRRK1-208ENST00000532029 POPDC2Q9HBU9 364 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 ARHGAP20Q9P2F6 1191 aa23.32■■□□□ 1.32
LRRK1-208ENST00000532029 TMCO5BA8MYB1 307 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 GOLGA6L6A8MZA4 724 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 GOLGA8SH3BPF8 625 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 MDM4O15151 490 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 PLEKP08567 350 aaPredicted RBP23.31■■□□□ 1.32
LRRK1-208ENST00000532029 GZMAP12544 262 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 PSMC3P17980 439 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 FAM102AQ5T9C2 384 aaPredicted RBP23.31■■□□□ 1.32
LRRK1-208ENST00000532029 WDR59Q6PJI9 974 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 VITQ6UXI7 678 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 BEND5Q7L4P6 421 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 SLC26A9Q7LBE3 791 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 MIB1Q86YT6 1006 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 SLC44A3Q8N4M1 653 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 OLIG1Q8TAK6 271 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 PIWIL1Q96J94 861 aaKnown RBP23.31■■□□□ 1.32
LRRK1-208ENST00000532029 PLA2G2FQ9BZM2 168 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 DEF6Q9H4E7 631 aa23.31■■□□□ 1.32
LRRK1-208ENST00000532029 THG1LQ9NWX6 298 aaKnown RBP23.31■■□□□ 1.32
LRRK1-208ENST00000532029 MARCH2Q9P0N8 246 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms