RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 LYSMD4Q5XG99 296 aa22.23■■□□□ 1.15
FDFT1-220ENST00000531733 BTBD8Q5XKL5 378 aa22.23■■□□□ 1.15
FDFT1-220ENST00000531733 SPOPLQ6IQ16 392 aa22.23■■□□□ 1.15
FDFT1-220ENST00000531733 C12orf29Q8N999 325 aa22.23■■□□□ 1.15
FDFT1-220ENST00000531733 KIAA0895Q8NCT3 520 aa22.23■■□□□ 1.15
FDFT1-220ENST00000531733 DUSP9Q99956 384 aaKnown RBP22.23■■□□□ 1.15
FDFT1-220ENST00000531733 SCNM1Q9BWG6 230 aa22.23■■□□□ 1.15
FDFT1-220ENST00000531733 NUSAP1Q9BXS6 441 aaKnown RBP22.23■■□□□ 1.15
FDFT1-220ENST00000531733 ADAM33Q9BZ11 813 aa22.23■■□□□ 1.15
FDFT1-220ENST00000531733 CD93Q9NPY3 652 aa22.23■■□□□ 1.15
FDFT1-220ENST00000531733 FAM49BQ9NUQ9 324 aa22.23■■□□□ 1.15
FDFT1-220ENST00000531733 DMAC2Q9NW81 257 aa22.23■■□□□ 1.15
FDFT1-220ENST00000531733 CALCOCO1Q9P1Z2 691 aa22.23■■□□□ 1.15
FDFT1-220ENST00000531733 PCDHA7Q9UN72 937 aa22.23■■□□□ 1.15
FDFT1-220ENST00000531733 PVALEFA0A1B0GWK0 134 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 TLR5O60602 858 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 NDST1P52848 882 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 MAP3K7CLP57077 242 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 LMAN2Q12907 356 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 STK4Q13043 487 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 SLC23A3Q6PIS1 610 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 TOGARAM2Q6ZUX3 1019 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 OR2I1PQ8NGU4 316 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 GATA6Q92908 595 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 TNIP3Q96KP6 325 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 KLF16Q9BXK1 252 aaPredicted RBP22.22■■□□□ 1.15
FDFT1-220ENST00000531733 MAGEF1Q9HAY2 307 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 CSNK1G1Q9HCP0 422 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.22■■□□□ 1.158e-7■■■■□ 19.9
FDFT1-220ENST00000531733 CGNQ9P2M7 1197 aaKnown RBP22.22■■□□□ 1.15
FDFT1-220ENST00000531733 DMXL2Q8TDJ6 3036 aa22.22■■□□□ 1.15
FDFT1-220ENST00000531733 MYH10P35580 1976 aa22.21■■□□□ 1.15
FDFT1-220ENST00000531733 PCDH15Q96QU1 1955 aa22.21■■□□□ 1.15
FDFT1-220ENST00000531733 SPAARA0A1B0GVQ0 90 aa22.21■■□□□ 1.15
FDFT1-220ENST00000531733 MDM4O15151 490 aa22.21■■□□□ 1.15
FDFT1-220ENST00000531733 HOXB2P14652 356 aa22.21■■□□□ 1.15
FDFT1-220ENST00000531733 RPL6Q02878 288 aaKnown RBP22.21■■□□□ 1.15
FDFT1-220ENST00000531733 PIP4P1Q86T03 277 aa22.21■■□□□ 1.15
FDFT1-220ENST00000531733 KDF1Q8NAX2 398 aaPredicted RBP22.21■■□□□ 1.15
FDFT1-220ENST00000531733 TWNKQ96RR1 684 aa22.21■■□□□ 1.15
FDFT1-220ENST00000531733 SLC6A17Q9H1V8 727 aa22.21■■□□□ 1.15
FDFT1-220ENST00000531733 DNAJC17Q9NVM6 304 aaKnown RBP22.21■■□□□ 1.15
FDFT1-220ENST00000531733 COMMD8Q9NX08 183 aa22.21■■□□□ 1.15
FDFT1-220ENST00000531733 PCNX2A6NKB5 2137 aa22.21■■□□□ 1.15
FDFT1-220ENST00000531733 IGHV1OR15-9A0A0B4J2B8 117 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 PRRT4C9JH25 899 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 HHLA1C9JL84 531 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 NEDD8-MDP1E9PL57 170 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 CYP26A1O43174 497 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 CFIP05156 583 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 NTSR1P30989 418 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 ASPAP45381 313 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 SPDYCQ5MJ68 293 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 C1orf220Q5T0J3 134 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 RESP18Q5W5W9 173 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 TPGS1Q6ZTW0 290 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 HTR3DQ70Z44 454 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 SLC41A1Q8IVJ1 513 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 CRYBG2Q8N1P7 616 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 JAKMIP2Q96AA8 810 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 NACA2Q9H009 215 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 KCTD10Q9H3F6 313 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 NMUR1Q9HB89 426 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 SERTAD1Q9UHV2 236 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 NUDT5Q9UKK9 219 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 STARD13Q9Y3M8 1113 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 RAD54BQ9Y620 910 aa22.2■■□□□ 1.14
FDFT1-220ENST00000531733 HYAL3O43820 417 aaPredicted RBP22.19■■□□□ 1.14
FDFT1-220ENST00000531733 CENPBP07199 599 aaPredicted RBP22.19■■□□□ 1.14
FDFT1-220ENST00000531733 TYRP14679 529 aa22.19■■□□□ 1.14
FDFT1-220ENST00000531733 NDUFV2P19404 249 aa22.19■■□□□ 1.14
FDFT1-220ENST00000531733 ADORA2BP29275 332 aa22.19■■□□□ 1.14
FDFT1-220ENST00000531733 FAM193AP78312 1265 aa22.19■■□□□ 1.14
FDFT1-220ENST00000531733 SEMA3BQ13214 749 aa22.19■■□□□ 1.14
FDFT1-220ENST00000531733 BYSLQ13895 437 aaKnown RBP22.19■■□□□ 1.14
FDFT1-220ENST00000531733 ZACNQ401N2 412 aa22.19■■□□□ 1.14
FDFT1-220ENST00000531733 GRAMD4Q6IC98 578 aa22.19■■□□□ 1.14
FDFT1-220ENST00000531733 KCNV2Q8TDN2 545 aa22.19■■□□□ 1.14
FDFT1-220ENST00000531733 GTPBP2Q9BX10 602 aaKnown RBP22.19■■□□□ 1.14
FDFT1-220ENST00000531733 BBS2Q9BXC9 721 aa22.19■■□□□ 1.14
FDFT1-220ENST00000531733 CAPN10Q9HC96 672 aa22.19■■□□□ 1.14
FDFT1-220ENST00000531733 AP5Z1O43299 807 aa22.18■■□□□ 1.14
FDFT1-220ENST00000531733 CACNG3O60359 315 aa22.18■■□□□ 1.14
FDFT1-220ENST00000531733 AP3M2P53677 418 aa22.18■■□□□ 1.14
FDFT1-220ENST00000531733 ZNF33AQ06730 810 aa22.18■■□□□ 1.14
FDFT1-220ENST00000531733 CLEC20AQ6ZU45 233 aa22.18■■□□□ 1.14
FDFT1-220ENST00000531733 SV2AQ7L0J3 742 aa22.18■■□□□ 1.14
FDFT1-220ENST00000531733 TRMT11Q7Z4G4 463 aaKnown RBP22.18■■□□□ 1.14
FDFT1-220ENST00000531733 SLC9A9Q8IVB4 645 aa22.18■■□□□ 1.14
FDFT1-220ENST00000531733 IPO4Q8TEX9 1081 aaKnown RBP22.18■■□□□ 1.14
FDFT1-220ENST00000531733 CYLDQ9NQC7 956 aa22.18■■□□□ 1.14
FDFT1-220ENST00000531733 TLR8Q9NR97 1041 aaKnown RBP22.18■■□□□ 1.14
FDFT1-220ENST00000531733 SLC6A14Q9UN76 642 aa22.18■■□□□ 1.14
FDFT1-220ENST00000531733 CYP8B1Q9UNU6 501 aa22.18■■□□□ 1.14
FDFT1-220ENST00000531733 WASH3PC4AMC7 463 aa22.17■■□□□ 1.14
FDFT1-220ENST00000531733 ACTN4O43707 911 aaKnown RBP22.17■■□□□ 1.14
FDFT1-220ENST00000531733 ASS1P00966 412 aaKnown RBP22.17■■□□□ 1.14
FDFT1-220ENST00000531733 CISD3P0C7P0 127 aa22.17■■□□□ 1.14
FDFT1-220ENST00000531733 ME1P48163 572 aa22.17■■□□□ 1.14
FDFT1-220ENST00000531733 DUOXA1Q1HG43 343 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms