RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 MMS22LQ6ZRQ5 1243 aa22.36■■□□□ 1.17
CAPN1-220ENST00000530567 PHF13Q86YI8 300 aaPredicted RBP22.36■■□□□ 1.17
CAPN1-220ENST00000530567 DRC7Q8IY82 874 aa22.36■■□□□ 1.17
CAPN1-220ENST00000530567 RSAD2Q8WXG1 361 aa22.36■■□□□ 1.17
CAPN1-220ENST00000530567 C18orf8Q96DM3 657 aa22.36■■□□□ 1.17
CAPN1-220ENST00000530567 NUDT5Q9UKK9 219 aa22.36■■□□□ 1.17
CAPN1-220ENST00000530567 SART1O43290 800 aaKnown RBP22.35■■□□□ 1.17
CAPN1-220ENST00000530567 LTFP02788 710 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 FYNP06241 537 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 ASGR2P07307 311 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 AVPR1AP37288 418 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 TAF5Q15542 800 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 KLHDC10Q6PID8 442 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 MTSS1LQ765P7 747 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 MON1BQ7L1V2 547 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.35■■□□□ 1.17
CAPN1-220ENST00000530567 XYLT1Q86Y38 959 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 GJD3Q8N144 294 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 KHSRPQ92945 711 aaKnown RBP eCLIP22.35■■□□□ 1.17
CAPN1-220ENST00000530567 ZFRQ96KR1 1074 aaKnown RBP22.35■■□□□ 1.17
CAPN1-220ENST00000530567 LRRC3BQ96PB8 259 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 KXD1Q9BQD3 176 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 C11orf70Q9BRQ4 267 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 SYNCQ9H7C4 482 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 KCNK12Q9HB15 430 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 ARHGAP26Q9UNA1 814 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 MYO10Q9HD67 2058 aa22.35■■□□□ 1.17
CAPN1-220ENST00000530567 MDM4O15151 490 aa22.34■■□□□ 1.17
CAPN1-220ENST00000530567 ECI2O75521 394 aa22.34■■□□□ 1.17
CAPN1-220ENST00000530567 NSFP46459 744 aaKnown RBP22.34■■□□□ 1.17
CAPN1-220ENST00000530567 SNX16P57768 344 aa22.34■■□□□ 1.17
CAPN1-220ENST00000530567 ZNF268Q14587 947 aaPredicted RBP22.34■■□□□ 1.17
CAPN1-220ENST00000530567 OR6B2Q6IFH4 312 aa22.34■■□□□ 1.17
CAPN1-220ENST00000530567 ACAD10Q6JQN1 1059 aa22.34■■□□□ 1.17
CAPN1-220ENST00000530567 EDEM1Q92611 657 aa22.34■■□□□ 1.17
CAPN1-220ENST00000530567 PLA2G2FQ9BZM2 168 aa22.34■■□□□ 1.17
CAPN1-220ENST00000530567 ZFP14Q9HCL3 533 aa22.34■■□□□ 1.17
CAPN1-220ENST00000530567 TDP1Q9NUW8 608 aa22.34■■□□□ 1.17
CAPN1-220ENST00000530567 KIF26AQ9ULI4 1882 aaPredicted RBP22.34■■□□□ 1.17
CAPN1-220ENST00000530567 A0A0C4DFX4 3053 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 RALAP11233 206 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 ASTE1Q2TB18 679 aaPredicted RBP22.33■■□□□ 1.17
CAPN1-220ENST00000530567 BTBD8Q5XKL5 378 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 SLC26A9Q7LBE3 791 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 DNAAF5Q86Y56 855 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 ZDHHC17Q8IUH5 632 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 MSANTD4Q8NCY6 345 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 ELSPBP1Q96BH3 223 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 UHRF1Q96T88 793 aaPredicted RBP22.33■■□□□ 1.17
CAPN1-220ENST00000530567 CHP1Q99653 195 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 ABCC13Q9NSE7 274 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 ASNSD1Q9NWL6 643 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 IGSF9Q9P2J2 1179 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 ADAMTS1Q9UHI8 967 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 NENFQ9UMX5 172 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 CPQQ9Y646 472 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 NCOR1O75376 2440 aa22.33■■□□□ 1.17
CAPN1-220ENST00000530567 TTC28Q96AY4 2481 aa22.33■■□□□ 1.16
CAPN1-220ENST00000530567 A0A087X0T9 212 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 HEPACAM2A8MVW5 462 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 FAM228BP0C875 321 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 MBL2P11226 248 aaPredicted RBP22.32■■□□□ 1.16
CAPN1-220ENST00000530567 GZMAP12544 262 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 SCNN1AP37088 669 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 EIF4A3P38919 411 aaKnown RBP22.32■■□□□ 1.16
CAPN1-220ENST00000530567 GSCP56915 257 aaPredicted RBP22.32■■□□□ 1.16
CAPN1-220ENST00000530567 CDK17Q00537 523 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 SLC6A3Q01959 620 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 USP4Q13107 963 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 MAPK8IP2Q13387 824 aaPredicted RBP22.32■■□□□ 1.16
CAPN1-220ENST00000530567 C10orf120Q5SQS8 335 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 MSANTD2Q6P1R3 559 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 VITQ6UXI7 678 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 TOGARAM2Q6ZUX3 1019 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 BEND5Q7L4P6 421 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 NXPE3Q969Y0 559 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 FAM149B1Q96BN6 582 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 ZNHIT6Q9NWK9 470 aaKnown RBP22.32■■□□□ 1.16
CAPN1-220ENST00000530567 SMPD4Q9NXE4 827 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 OBP2AQ9NY56 170 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 ADAM22Q9P0K1 906 aa22.32■■□□□ 1.16
CAPN1-220ENST00000530567 SSU72P8A0A1W2PR75 194 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 TMCO5BA8MYB1 307 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 GLI1P08151 1106 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 TCF3P15923 654 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 ATP5C1P36542 298 aaKnown RBP22.31■■□□□ 1.16
CAPN1-220ENST00000530567 YWHAZP63104 245 aaKnown RBP22.31■■□□□ 1.16
CAPN1-220ENST00000530567 C1QBPQ07021 282 aaKnown RBP22.31■■□□□ 1.16
CAPN1-220ENST00000530567 ZNF77Q15935 545 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 RNF135Q8IUD6 432 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 CELF5Q8N6W0 485 aaKnown RBP22.31■■□□□ 1.16
CAPN1-220ENST00000530567 SPC24Q8NBT2 197 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 SLC2A13Q96QE2 648 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 CDK5RAP1Q96SZ6 601 aaKnown RBP22.31■■□□□ 1.16
CAPN1-220ENST00000530567 KLF16Q9BXK1 252 aaPredicted RBP22.31■■□□□ 1.16
CAPN1-220ENST00000530567 KIF9Q9HAQ2 790 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 IMPACTQ9P2X3 320 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 DNMT3LQ9UJW3 386 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 NAALADL1Q9UQQ1 740 aa22.31■■□□□ 1.16
CAPN1-220ENST00000530567 TCRBV5S1A1TA0A578 114 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms