RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 TPH1P17752 444 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 HTR7P34969 479 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 GATMP50440 423 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 SUMO2P61956 95 aaKnown RBP3.59□□□□□ -1.83
NUP98-218ENST00000530516 DEUP1Q05D60 604 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 ZNF543Q08ER8 600 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 STK3Q13188 491 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 AWAT1Q58HT5 328 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 KLHDC7AQ5VTJ3 777 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 PPP4R4Q6NUP7 873 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 MRPL10Q7Z7H8 261 aaKnown RBP3.59□□□□□ -1.83
NUP98-218ENST00000530516 ZDHHC17Q8IUH5 632 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 GALNT4Q8N4A0 578 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 RNF152Q8N8N0 203 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 C11orf44Q8N8P7 122 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 KAZALD1Q96I82 304 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 ZC3H10Q96K80 434 aaKnown RBP3.59□□□□□ -1.83
NUP98-218ENST00000530516 C5orf34Q96MH7 638 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 UNKQ9C0B0 810 aaKnown RBP3.59□□□□□ -1.83
NUP98-218ENST00000530516 NUP62CLQ9H1M0 184 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 VPS16Q9H269 839 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 FAM83DQ9H4H8 585 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 ZNF212Q9UDV6 495 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 ASAP1Q9ULH1 1129 aa3.59□□□□□ -1.83
NUP98-218ENST00000530516 AQP7P3A6NL99 342 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 PSMD9O00233 223 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 PQBP1O60828 265 aaKnown RBP3.58□□□□□ -1.84
NUP98-218ENST00000530516 ANXA2P07355 339 aaKnown RBP3.58□□□□□ -1.84
NUP98-218ENST00000530516 CHRM5P08912 532 aaPredicted RBP3.58□□□□□ -1.84
NUP98-218ENST00000530516 TSHRP16473 764 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 RPL17P18621 184 aaKnown RBP3.58□□□□□ -1.84
NUP98-218ENST00000530516 COPAP53621 1224 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 DAG1Q14118 895 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 SEC23BQ15437 767 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 FAM187BQ17R55 369 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 SLC2A7Q6PXP3 512 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 RAB11FIP4Q86YS3 637 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 SAMD14Q8IZD0 417 aaPredicted RBP3.58□□□□□ -1.84
NUP98-218ENST00000530516 PRSS3P2Q8NHM4 247 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 PNISRQ8TF01 805 aaKnown RBP3.58□□□□□ -1.84
NUP98-218ENST00000530516 TTC17Q96AE7 1141 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 TRIM36Q9NQ86 728 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 TBC1D23Q9NUY8 699 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 WWOXQ9NZC7 414 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 DNAJB11Q9UBS4 358 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 ZNF580Q9UK33 172 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 HPSEQ9Y251 543 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 SLC27A6Q9Y2P4 619 aa3.58□□□□□ -1.84
NUP98-218ENST00000530516 SMIM35A0A1B0GVV1 85 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 RHPN2P1A8MT19 583 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 A8MVJ9 347 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 SOCS2O14508 198 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 APAF1O14727 1248 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 KPNA5O15131 536 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 INMTO95050 263 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 IL18RAPO95256 599 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 MT-CO3P00414 261 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 CREB1P16220 341 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 COL15A1P39059 1388 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 PRIM2P49643 509 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 MTHFSP49914 203 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 CASP5P51878 434 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 COPB1P53618 953 aaKnown RBP3.57□□□□□ -1.84
NUP98-218ENST00000530516 LARS2Q15031 903 aaKnown RBP3.57□□□□□ -1.84
NUP98-218ENST00000530516 CERKLQ49MI3 558 aaPredicted RBP3.57□□□□□ -1.84
NUP98-218ENST00000530516 RRAGBQ5VZM2 374 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 LIX1LQ8IVB5 337 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 MAFAQ8NHW3 353 aaPredicted RBP3.57□□□□□ -1.84
NUP98-218ENST00000530516 ZNF398Q8TD17 642 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 IGFBPL1Q8WX77 278 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 EDC3Q96F86 508 aaKnown RBP3.57□□□□□ -1.84
NUP98-218ENST00000530516 ZDHHC12Q96GR4 267 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 ZNF668Q96K58 619 aaPredicted RBP3.57□□□□□ -1.84
NUP98-218ENST00000530516 C8orf48Q96LL4 319 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 FAM227BQ96M60 508 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 SARGQ9BW04 601 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 GJB4Q9NTQ9 266 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 GAR1Q9NY12 217 aaKnown RBP3.57□□□□□ -1.84
NUP98-218ENST00000530516 SNX13Q9Y5W8 968 aa3.57□□□□□ -1.84
NUP98-218ENST00000530516 WDR17Q8IZU2 1322 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 POM121BA6NF01 834 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 KCNU1A8MYU2 1149 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 BTBD19C9JJ37 291 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 CBFA2T3O75081 653 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 BCAR3O75815 825 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 USP1O94782 785 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 TMEM191BP0C7N4 346 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 ARP10275 920 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 RBL1P28749 1068 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 ARHGAP25P42331 645 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 MTAPQ13126 283 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 DAZAP2Q15038 168 aaPredicted RBP3.56□□□□□ -1.84
NUP98-218ENST00000530516 ZNF260Q3ZCT1 412 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 MIDNQ504T8 468 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 RUSC1-AS1Q66K80 236 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 GRHL2Q6ISB3 625 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 CLEC9AQ6UXN8 241 aa3.56□□□□□ -1.84
NUP98-218ENST00000530516 SERPINA13PQ6UXR4 307 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms