RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 WBP2Q969T9 261 aa17.71■□□□□ 0.43
SF3B2-209ENST00000530322 LIMA1Q9UHB6 759 aaKnown RBP17.71■□□□□ 0.43
SF3B2-209ENST00000530322 DNMT3LQ9UJW3 386 aa17.71■□□□□ 0.43
SF3B2-209ENST00000530322 H0Y858 1186 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 FOXN3O00409 490 aaPredicted RBP17.7■□□□□ 0.42
SF3B2-209ENST00000530322 SLC9A3R1O14745 358 aaPredicted RBP17.7■□□□□ 0.42
SF3B2-209ENST00000530322 MDM4O15151 490 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 THAP12O43422 761 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 MED7O43513 233 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 GREM1O60565 184 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 NFATC1O95644 943 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 GJA4P35212 333 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 USP8P40818 1118 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 ANGPT1Q15389 498 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 DENND1BQ6P3S1 775 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 TADA2BQ86TJ2 420 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 SIX6OS1Q8N1H7 587 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 HSFY1Q96LI6 401 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 CDK5RAP1Q96SZ6 601 aaKnown RBP17.7■□□□□ 0.42
SF3B2-209ENST00000530322 BPIFA3Q9BQP9 254 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 FUCA2Q9BTY2 467 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 LSM14BQ9BX40 385 aaKnown RBP17.7■□□□□ 0.42
SF3B2-209ENST00000530322 NAT10Q9H0A0 1025 aaKnown RBP17.7■□□□□ 0.42
SF3B2-209ENST00000530322 LMAN1LQ9HAT1 526 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 CNGB3Q9NQW8 809 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 TBC1D14Q9P2M4 693 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 SH3BP1Q9Y3L3 701 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 FHOD1Q9Y613 1164 aa17.7■□□□□ 0.42
SF3B2-209ENST00000530322 LRRC10BA6NIK2 292 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 TRDMT1O14717 391 aaKnown RBP17.69■□□□□ 0.42
SF3B2-209ENST00000530322 TPM2P07951 284 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 PNMA6AP0CW24 399 aaPredicted RBP17.69■□□□□ 0.42
SF3B2-209ENST00000530322 IRF1P10914 325 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 LCP1P13796 627 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 UCHL3P15374 230 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 PTMSP20962 102 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 CLCN1P35523 988 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 RPL34P49207 117 aaKnown RBP17.69■□□□□ 0.42
SF3B2-209ENST00000530322 COPB1P53618 953 aaKnown RBP17.69■□□□□ 0.42
SF3B2-209ENST00000530322 DAOAP59103 153 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 AMPD2Q01433 879 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 NHLH1Q02575 133 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 NR1H3Q13133 447 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 GAB4Q2WGN9 574 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 TMEM196Q5HYL7 178 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 HTR3DQ70Z44 454 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 APTXQ7Z2E3 356 aaKnown RBP17.69■□□□□ 0.42
SF3B2-209ENST00000530322 C1orf210Q8IVY1 113 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 FAM71AQ8IYT1 594 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 OTUB2Q96DC9 234 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 NAA15Q9BXJ9 866 aaKnown RBP17.69■□□□□ 0.42
SF3B2-209ENST00000530322 CHRDQ9H2X0 955 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 PLCB1Q9NQ66 1216 aa17.69■□□□□ 0.42
SF3B2-209ENST00000530322 YJEFN3A6XGL0 299 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 E7ENQ6 273 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 PIK3R2O00459 728 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 CYP17A1P05093 508 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 PTK2Q05397 1052 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 RAPGEF1Q13905 1077 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 CCINQ13939 588 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 DRAP1Q14919 205 aaPredicted RBP17.68■□□□□ 0.42
SF3B2-209ENST00000530322 DHCR24Q15392 516 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 FKBP15Q5T1M5 1219 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 NAIF1Q69YI7 327 aaPredicted RBP17.68■□□□□ 0.42
SF3B2-209ENST00000530322 BBS7Q8IWZ6 715 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 DHX40Q8IX18 779 aaKnown RBP17.68■□□□□ 0.42
SF3B2-209ENST00000530322 ANKRD20A12PQ8NF67 263 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 STK32AQ8WU08 396 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 IRF2BPLQ9H1B7 796 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 GANQ9H2C0 597 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 FBRSL1Q9HCM7 1045 aaKnown RBP17.68■□□□□ 0.42
SF3B2-209ENST00000530322 RBM12Q9NTZ6 932 aaKnown RBP17.68■□□□□ 0.42
SF3B2-209ENST00000530322 SPATA6Q9NWH7 488 aaPredicted RBP17.68■□□□□ 0.42
SF3B2-209ENST00000530322 CYTH4Q9UIA0 394 aa17.68■□□□□ 0.42
SF3B2-209ENST00000530322 SYCE3A1L190 88 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 LGALS16A8MUM7 142 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 STC2O76061 302 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 CDK11BP21127 795 aaKnown RBP17.67■□□□□ 0.42
SF3B2-209ENST00000530322 PLA2G5P39877 138 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 KLK7P49862 253 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 GALK1P51570 392 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 GOLGA8FQ08AF8 430 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 GOLGA8DPQ0D2H9 430 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 EFEMP1Q12805 493 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 MTAPQ13126 283 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 LRRC32Q14392 662 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 DGKKQ5KSL6 1271 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 BSPRYQ5W0U4 402 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 BTBD8Q5XKL5 378 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 FSTL4Q6MZW2 842 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 RHBDF2Q6PJF5 856 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 SLC47A2Q86VL8 602 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 MIB1Q86YT6 1006 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 MAML2Q8IZL2 1156 aaPredicted RBP17.67■□□□□ 0.42
SF3B2-209ENST00000530322 CLEC4CQ8WTT0 213 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 IRGQQ8WZA9 623 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 P2RY13Q9BPV8 354 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 IER2Q9BTL4 223 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 RASAL2Q9UJF2 1139 aa17.67■□□□□ 0.42
SF3B2-209ENST00000530322 PCDHGC3Q9UN70 934 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms