RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 COBLL1Q53SF7 1204 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 SLC24A5Q71RS6 500 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 MRPL10Q7Z7H8 261 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 USP33Q8TEY7 942 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 SMARCE1Q969G3 411 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 TOP1MTQ969P6 601 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 ZBTB45Q96K62 511 aaPredicted RBP9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 NUP62CLQ9H1M0 184 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 TTYH1Q9H313 450 aaPredicted RBP9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 NXF3Q9H4D5 531 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 ELAC1Q9H777 363 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 PPT2Q9UMR5 302 aa9.52□□□□□ -0.89
CCDC90B-217ENST00000530253 TTC3P53804 2025 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 BDP1A6H8Y1 2624 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 A0A0B4J269 797 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 HNRNPDLO14979 420 aaKnown RBP9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 INPPL1O15357 1258 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 SMC2O95347 1197 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 GJB5O95377 273 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 NPTXRO95502 500 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 AMHP03971 560 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 MCF2P10911 925 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 ZSCAN20P17040 1043 aaPredicted RBP9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 PAMP19021 973 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 KCNJ6P48051 423 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 LIG4P49917 911 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 RAB27AP51159 221 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 HTRA4P83105 476 aaPredicted RBP9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 AMPD2Q01433 879 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 KLHL40Q2TBA0 621 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 DCAF4L1Q3SXM0 396 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 ZNF568Q3ZCX4 644 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 ZCWPW2Q504Y3 356 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 ZNF658Q5TYW1 1059 aaPredicted RBP9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 TWF2Q6IBS0 349 aaKnown RBP9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 FAM124AQ86V42 546 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 HERC6Q8IVU3 1022 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 MYOCDQ8IZQ8 938 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 GUF1Q8N442 669 aaKnown RBP9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 PHOSPHO2Q8TCD6 241 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 GUCD1Q96NT3 240 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 SAMD11Q96NU1 681 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 ACCSQ96QU6 501 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 MTIF3Q9H2K0 278 aaKnown RBP9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 KCTD10Q9H3F6 313 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 RXFP1Q9HBX9 757 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 RMND1Q9NWS8 449 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 TMEM161AQ9NX61 479 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 HOOK1Q9UJC3 728 aaKnown RBP9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 HES2Q9Y543 173 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 IPPQ9Y573 584 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 PCDHB2Q9Y5E7 798 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 SLC4A7Q9Y6M7 1214 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 MYO9BQ13459 2157 aa9.51□□□□□ -0.89
CCDC90B-217ENST00000530253 C2orf71A6NGG8 1288 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 LINC00271P0C7V0 271 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 FGFR1P11362 822 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 ATP2A2P16615 1042 aaKnown RBP9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 GATMP50440 423 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 NCBP1Q09161 790 aaKnown RBP9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 NOLC1Q14978 699 aaKnown RBP eCLIP9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 CLLU1OSQ5K130 101 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 ZBTB41Q5SVQ8 909 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 CPZQ66K79 652 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 STXBP4Q6ZWJ1 553 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 ADAT2Q7Z6V5 191 aaKnown RBP9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 DCP2Q8IU60 420 aaKnown RBP9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 NELFCDQ8IXH7 590 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 C12orf56Q8IXR9 622 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 LINC00482Q8N8I6 264 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 ZSWIM2Q8NEG5 633 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 ADCY4Q8NFM4 1077 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 ADAMTS17Q8TE56 1095 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 LPPQ93052 612 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 CCDC47Q96A33 483 aaKnown RBP9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 ZNF689Q96CS4 500 aaPredicted RBP9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 CBWD1Q9BRT8 395 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 KLHL25Q9H0H3 589 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 TMEM206Q9H813 350 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 AGPAT3Q9NRZ7 376 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 ANKFY1Q9P2R3 1169 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 VCANP13611 3396 aa9.5□□□□□ -0.89
CCDC90B-217ENST00000530253 NPHS1O60500 1241 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 DGKIO75912 1065 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 PLATP00750 562 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 PRCPP42785 496 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 RABGGTBP53611 331 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 SMAD3P84022 425 aaKnown RBP9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 KNOP1Q1ED39 458 aaKnown RBP9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 XKR4Q5GH76 650 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 CCDC183Q5T5S1 534 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 ISM2Q6H9L7 571 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 ADSSL1Q8N142 457 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 TRIML1Q8N9V2 468 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 GSTCDQ8NEC7 633 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 TMEM174Q8WUU8 243 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 BICD1Q96G01 975 aa9.49□□□□□ -0.89
CCDC90B-217ENST00000530253 NOX5Q96PH1 765 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms