RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 LCP1P13796 627 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 ARSAP15289 507 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 COL9A1P20849 921 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 SOX9P48436 509 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 IFNAR2P48551 515 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 BPIFB4P59827 614 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 YWHAGP61981 247 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 SYCP1Q15431 976 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 EML3Q32P44 896 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 C1orf228Q6PIY5 440 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 TADA2BQ86TJ2 420 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 SLC47A2Q86VL8 602 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 RALGPS2Q86X27 583 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 SIX6OS1Q8N1H7 587 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 PJA1Q8NG27 643 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 FAM3CQ92520 227 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 MSANTD3Q96H12 275 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 CDK5RAP1Q96SZ6 601 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 CBX8Q9HC52 389 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 LTB4R2Q9NPC1 389 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 FAM207AQ9NSI2 230 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 DNMT3LQ9UJW3 386 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 NUDT5Q9UKK9 219 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 PCDHGC3Q9UN70 934 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 DAAM1Q9Y4D1 1078 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 WNT6Q9Y6F9 365 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 F5P12259 2224 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 YJEFN3A6XGL0 299 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 E7ENQ6 273 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 SPECC1L-ADORA2AF8WAN1 911 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 SLC9A3R1O14745 358 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 EPHB6O15197 1021 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 CTHP32929 405 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 ACADSBP45954 432 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 NUBP1P53384 320 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 DAOAP59103 153 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 POLR2FP61218 127 aaKnown RBP13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 UBXN2BQ14CS0 331 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 NFKBIBQ15653 356 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 C10orf120Q5SQS8 335 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 BSPRYQ5W0U4 402 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 ADGRG2Q8IZP9 1017 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 ZNF687Q8N1G0 1237 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 IRGQQ8WZA9 623 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 ATP2A3Q93084 1043 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 SLC4A5Q9BY07 1137 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 LHX5Q9H2C1 402 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 ECT2Q9H8V3 914 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 DLGAP2Q9P1A6 1054 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 TBC1D14Q9P2M4 693 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 CYTH4Q9UIA0 394 aa13.3□□□□□ -0.28
CCDC90B-216ENST00000529856 F8VZ95 297 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 PIK3R2O00459 728 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 MDM4O15151 490 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 TEX33O43247 280 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 GREM1O60565 184 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 FBXO21O94952 628 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 DCNP07585 359 aaKnown RBP13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 TARSP26639 723 aaKnown RBP13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 KRT9P35527 623 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 JAM2P57087 298 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 FZD5Q13467 585 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 BTBD8Q5XKL5 378 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 HTR3DQ70Z44 454 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 TMEM110Q86TL2 294 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 LUZP1Q86V48 1076 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 SCUBE3Q8IX30 993 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 CCDC105Q8IYK2 499 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 CPA6Q8N4T0 437 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 WDTC1Q8N5D0 677 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 NEK11Q8NG66 645 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 WBP2Q969T9 261 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 CLDN23Q96B33 292 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 PCMTD1Q96MG8 357 aaPredicted RBP13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 KCNH6Q9H252 994 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 NLRC4Q9NPP4 1024 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 ST7Q9NRC1 585 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 RAPGEFL1Q9UHV5 662 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 SH3BP1Q9Y3L3 701 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 HCN4Q9Y3Q4 1203 aa13.29□□□□□ -0.28
CCDC90B-216ENST00000529856 SCAMP3O14828 347 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 NCAM2O15394 837 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 NFATC1O95644 943 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 CYP11B1P15538 503 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 GJA4P35212 333 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 COG7P83436 770 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 AMPD2Q01433 879 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 GOLGA8FQ08AF8 430 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 GOLGA8DPQ0D2H9 430 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 EFEMP1Q12805 493 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 NR1H3Q13133 447 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 FILIP1LQ4L180 1135 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 TXNDC11Q6PKC3 985 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 RSRC2Q7L4I2 434 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 DTWD2Q8NBA8 298 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 CLEC4CQ8WTT0 213 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 OTUB2Q96DC9 234 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 CHFRQ96EP1 664 aa13.28□□□□□ -0.28
CCDC90B-216ENST00000529856 PRRX2Q99811 253 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms