RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 DNAAF5Q86Y56 855 aa14.29□□□□□ -0.12
SMCO4-205ENST00000529714 RHOT2Q8IXI1 618 aa14.29□□□□□ -0.12
SMCO4-205ENST00000529714 RFFLQ8WZ73 363 aa14.29□□□□□ -0.12
SMCO4-205ENST00000529714 NDRG1Q92597 394 aaKnown RBP14.29□□□□□ -0.12
SMCO4-205ENST00000529714 MRPS31Q92665 395 aaKnown RBP14.29□□□□□ -0.12
SMCO4-205ENST00000529714 FAM149B1Q96BN6 582 aa14.29□□□□□ -0.12
SMCO4-205ENST00000529714 CALR3Q96L12 384 aaKnown RBP14.29□□□□□ -0.12
SMCO4-205ENST00000529714 ZNF830Q96NB3 372 aaPredicted RBP14.29□□□□□ -0.12
SMCO4-205ENST00000529714 NECTIN4Q96NY8 510 aa14.29□□□□□ -0.12
SMCO4-205ENST00000529714 SLC2A13Q96QE2 648 aa14.29□□□□□ -0.12
SMCO4-205ENST00000529714 DESI2Q9BSY9 194 aa14.29□□□□□ -0.12
SMCO4-205ENST00000529714 OLA1Q9NTK5 396 aaKnown RBP14.29□□□□□ -0.12
SMCO4-205ENST00000529714 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.29□□□□□ -0.12
SMCO4-205ENST00000529714 RRN3Q9NYV6 651 aa14.29□□□□□ -0.12
SMCO4-205ENST00000529714 CHORDC1Q9UHD1 332 aaPredicted RBP14.29□□□□□ -0.12
SMCO4-205ENST00000529714 CD207Q9UJ71 328 aa14.29□□□□□ -0.12
SMCO4-205ENST00000529714 COG5Q9UP83 839 aa14.29□□□□□ -0.12
SMCO4-205ENST00000529714 DENND4AQ7Z401 1863 aa14.29□□□□□ -0.12
SMCO4-205ENST00000529714 ATMINO43313 823 aaPredicted RBP14.28□□□□□ -0.12
SMCO4-205ENST00000529714 MTA2O94776 668 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 FYNP06241 537 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 NOS2P35228 1153 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 CCR2P41597 374 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 MATKP42679 507 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 HADHBP55084 474 aaKnown RBP14.28□□□□□ -0.12
SMCO4-205ENST00000529714 TAF5Q15542 800 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 CCDC85BQ15834 202 aaPredicted RBP14.28□□□□□ -0.12
SMCO4-205ENST00000529714 MSANTD2Q6P1R3 559 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 DCUN1D2Q6PH85 259 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 EP400NLQ6ZTU2 488 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 HFE2Q6ZVN8 426 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 SHKBP1Q8TBC3 707 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 FEZF2Q8TBJ5 459 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 FNIP1Q8TF40 1166 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 HLA-CQ95604 372 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 ARHGEF26Q96DR7 871 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 TSGA10Q9BZW7 698 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 ATXN3LQ9H3M9 355 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 METTL5Q9NRN9 209 aaKnown RBP14.28□□□□□ -0.12
SMCO4-205ENST00000529714 TMEM51Q9NW97 253 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 OSER1Q9NX31 292 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 MYO1AQ9UBC5 1043 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 LCMT1Q9UIC8 334 aa14.28□□□□□ -0.12
SMCO4-205ENST00000529714 MRPS23Q9Y3D9 190 aaKnown RBP14.28□□□□□ -0.12
SMCO4-205ENST00000529714 A0A1W2PRU2 124 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 TMEM191CA6NGB0 347 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 C2CD4BA6NLJ0 364 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 CAPN9O14815 690 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 TLR5O60602 858 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 MOSPD3O75425 235 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 OLFM2O95897 454 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 OAS1P00973 400 aaKnown RBP14.27□□□□□ -0.13
SMCO4-205ENST00000529714 RARGP13631 454 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 RFC1P35251 1148 aaPredicted RBP14.27□□□□□ -0.13
SMCO4-205ENST00000529714 FLT3P36888 993 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 PGFP49763 221 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 NTHL1P78549 312 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 KIF5AQ12840 1032 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 SKIV2LQ15477 1246 aaKnown RBP14.27□□□□□ -0.13
SMCO4-205ENST00000529714 SLC5A9Q2M3M2 681 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 ARHGAP15Q53QZ3 475 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 HECTD3Q5T447 861 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 RNF139Q8WU17 664 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 SUSD6Q92537 303 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 NT5C3BQ969T7 300 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 MCEEQ96PE7 176 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 DDX23Q9BUQ8 820 aaKnown RBP14.27□□□□□ -0.13
SMCO4-205ENST00000529714 NUP85Q9BW27 656 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 SMOC2Q9H3U7 446 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.27□□□□□ -0.13
SMCO4-205ENST00000529714 CTTNBP2NLQ9P2B4 639 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 STAP1Q9ULZ2 295 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 PPP2R2CQ9Y2T4 447 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.27□□□□□ -0.13
SMCO4-205ENST00000529714 BRWD1Q9NSI6 2320 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 DOCK6Q96HP0 2047 aa14.27□□□□□ -0.13
SMCO4-205ENST00000529714 RCCD1A6NED2 376 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 DPYSL4O14531 572 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 ZSCAN12O43309 604 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 GRAP2O75791 330 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 ABL1P00519 1130 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 NCAM1P13591 858 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 KCNA5P22460 613 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 FSHRP23945 695 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 SDC4P31431 198 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 PTPN9P43378 593 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 ZNF143P52747 638 aaPredicted RBP14.26□□□□□ -0.13
SMCO4-205ENST00000529714 RPL7AP62424 266 aaKnown RBP14.26□□□□□ -0.13
SMCO4-205ENST00000529714 NNTQ13423 1086 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 SMAD4Q13485 552 aaKnown RBP14.26□□□□□ -0.13
SMCO4-205ENST00000529714 DCAF6Q58WW2 860 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 RSRC2Q7L4I2 434 aaKnown RBP14.26□□□□□ -0.13
SMCO4-205ENST00000529714 PHLDB2Q86SQ0 1253 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 DEFB106AQ8N104 65 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 JOSD2Q8TAC2 188 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 SLC35G2Q8TBE7 412 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 ZNF564Q8TBZ8 553 aaPredicted RBP14.26□□□□□ -0.13
SMCO4-205ENST00000529714 TRIM44Q96DX7 344 aaPredicted RBP14.26□□□□□ -0.13
SMCO4-205ENST00000529714 TCEAL4Q96EI5 215 aa14.26□□□□□ -0.13
SMCO4-205ENST00000529714 NPY6RQ99463 290 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms