RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 RTN3O95197 1032 aaPredicted RBP12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 PLCG1P19174 1290 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 LMO2P25791 158 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 YWHAQP27348 245 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 CSNK1EP49674 416 aaKnown RBP12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 TUBP50607 506 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 TOB1P50616 345 aaPredicted RBP12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 TPMTP51580 245 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 CYP27A1Q02318 531 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 MYO1EQ12965 1108 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 STARD3Q14849 445 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 CCDC142Q17RM4 750 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 KIF19Q2TAC6 998 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 HECTD3Q5T447 861 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 HTR3DQ70Z44 454 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 BBS7Q8IWZ6 715 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 POMGNT1Q8WZA1 660 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 MYLPFQ96A32 169 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 CDK5RAP3Q96JB5 506 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 FIZ1Q96SL8 496 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 CRTAC1Q9NQ79 661 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 MARK1Q9P0L2 795 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 GMIPQ9P107 970 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 FTSJ1Q9UET6 329 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 EIF2B4Q9UI10 523 aaKnown RBP12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 ANKRD6Q9Y2G4 727 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 RAD54BQ9Y620 910 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 ANAPC1Q9H1A4 1944 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 GOLGA4Q13439 2230 aaKnown RBP12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 KCNJ18B7U540 433 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 F8VP50 259 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 WISP1O95388 367 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 LDHAP00338 332 aaKnown RBP12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 CISD3P0C7P0 127 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 WARSP23381 471 aaKnown RBP12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 ADSSP30520 456 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 CCT8P50990 548 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 TLE3Q04726 772 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 ORC1Q13415 861 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 ENPP2Q13822 863 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 FUT11Q495W5 492 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 TMEM119Q4V9L6 283 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 PKDCCQ504Y2 493 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 TAF1BQ53T94 588 aaPredicted RBP12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 NUP93Q8N1F7 819 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 KBTBD7Q8WVZ9 684 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 SIPA1Q96FS4 1042 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 PCED1BQ96HM7 432 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 TMEM176AQ96HP8 235 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 COMMD8Q9NX08 183 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 FBXO10Q9UK96 956 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 R3HCC1Q9Y3T6 440 aaKnown RBP12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 SNX11Q9Y5W9 270 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 STON1Q9Y6Q2 735 aa12.35□□□□□ -0.43
AMBRA1-207ENST00000529553 KNTC1P50748 2209 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 WASH3PC4AMC7 463 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 HCRTO43612 131 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 TYRP14679 529 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 ACTN2P35609 894 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 GRIA4P48058 902 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 DGKGP49619 791 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 TARDBPQ13148 414 aaKnown RBP eCLIP12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 CCDC157Q569K6 752 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 GPBP1Q86WP2 473 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 TMPRSS6Q8IU80 811 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 BRSK2Q8IWQ3 736 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 PRCCQ92733 491 aaPredicted RBP12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 HVCN1Q96D96 273 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 PLIN2Q99541 437 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 LLPHQ9BRT6 129 aaKnown RBP12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 BBS2Q9BXC9 721 aa12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 MKRN2Q9H000 416 aaKnown RBP12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.34□□□□□ -0.432e-7■■■■■ 86.5
AMBRA1-207ENST00000529553 MYO18AQ92614 2054 aaKnown RBP12.34□□□□□ -0.43
AMBRA1-207ENST00000529553 PTPRQQ9UMZ3 2332 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 TISP43B9A030 160 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 NEDD8-MDP1E9PL57 170 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 SYNCRIPO60506 623 aaKnown RBP12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 RFPL3O75679 317 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 KRT19P08727 400 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 PDGFRBP09619 1106 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 C7P10643 843 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 ACADMP11310 421 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 C6P13671 934 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 ACO1P21399 889 aaKnown RBP12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 IL12RB1P42701 662 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 UCNP55089 124 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 PSMC1P62191 440 aaKnown RBP12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 CXADRP78310 365 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 ZNF720Q7Z2F6 126 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 FAM181AQ8N9Y4 354 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 FBXO32Q969P5 355 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 HPDLQ96IR7 371 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 FAM213AQ9BRX8 229 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 ELOVL4Q9GZR5 314 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 IL37Q9NZH6 218 aa12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 THAP10Q9P2Z0 257 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 CHORDC1Q9UHD1 332 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-207ENST00000529553 SIX4Q9UIU6 781 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms