RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 BLOC1S6Q9UL45 172 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 ARVCFO00192 962 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 KRT1P04264 644 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 KRT10P13645 584 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 TAF11Q15544 211 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 DUPD1Q68J44 220 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 ECHDC2Q86YB7 292 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 CHMP6Q96FZ7 201 aa17.44■□□□□ 0.38
CAPRIN1-207ENST00000529307 C2CD4BA6NLJ0 364 aa17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 ATP2A2P16615 1042 aaKnown RBP17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 CUL1Q13616 776 aa17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 ARHGEF6Q15052 776 aa17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 SMTNL2Q2TAL5 461 aa17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 CD300LGQ6UXG3 332 aa17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 PAQR9Q6ZVX9 377 aa17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 CLEC4CQ8WTT0 213 aa17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 STK32AQ8WU08 396 aa17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 FAM118BQ9BPY3 351 aa17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 ERP44Q9BS26 406 aa17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 TRIM4Q9C037 500 aa17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 G3BP2Q9UN86 482 aaKnown RBP17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 INPP5FQ9Y2H2 1132 aa17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 UTP11Q9Y3A2 253 aaKnown RBP17.43■□□□□ 0.38
CAPRIN1-207ENST00000529307 FAM187AA6NFU0 413 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 C3orf70A6NLC5 250 aaPredicted RBP17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 CLDN5O00501 218 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 BST2Q10589 180 aaKnown RBP17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 DYNC1I2Q13409 638 aaKnown RBP17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 TIGD5Q53EQ6 642 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 KCNT1Q5JUK3 1230 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 RCOR2Q8IZ40 523 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 RXFP2Q8WXD0 754 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 DCLK3Q9C098 648 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 ZWILCHQ9H900 591 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 I3L4J1 428 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 PTPN1P18031 435 aaKnown RBP17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 RPL34P49207 117 aaKnown RBP17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 CDK7P50613 346 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 ZNF143P52747 638 aaPredicted RBP17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 BCAT1P54687 386 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 USP4Q13107 963 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 HLTFQ14527 1009 aaKnown RBP eCLIP17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 C15orf59Q2T9L4 293 aaPredicted RBP17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 PAN2Q504Q3 1202 aaKnown RBP17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 ODF2Q5BJF6 829 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 EIF1ADQ8N9N8 165 aaKnown RBP17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 CENPTQ96BT3 561 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 TNIP3Q96KP6 325 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 MIS12Q9H081 205 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 CRTAC1Q9NQ79 661 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 RGS18Q9NS28 235 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 PCSK1NQ9UHG2 260 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 PTPN22Q9Y2R2 807 aa17.42■□□□□ 0.38
CAPRIN1-207ENST00000529307 C9IYK1 514 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 H0YGN5 161 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 BEST1O76090 585 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 MIPP30301 263 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 RPL9P32969 192 aaKnown RBP17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 SLC6A3Q01959 620 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 MTFR1Q15390 333 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 ZFYVE27Q5T4F4 411 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 SPOCD1Q6ZMY3 1216 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 POLNQ7Z5Q5 900 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 CCDC105Q8IYK2 499 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 PGBD4Q96DM1 585 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 PEBP4Q96S96 227 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 HNRNPABQ99729 332 aaKnown RBP17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 CNOT10Q9H9A5 744 aaKnown RBP17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 DDX43Q9NXZ2 648 aaKnown RBP17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 NFS1Q9Y697 457 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 KBTBD13C9JR72 458 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 F8W810 466 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 B4GALT3O60512 393 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 PDGFRAP16234 1089 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 GPD1P21695 349 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 GPNMBQ14956 572 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 CCDC14Q49A88 953 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 CMPK2Q5EBM0 449 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 KAZNQ674X7 775 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 CYP4V2Q6ZWL3 525 aaPredicted RBP17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 LMNTD2Q8IXW0 634 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 CFAP57Q96MR6 1250 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 RAB17Q9H0T7 212 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 SNX24Q9Y343 169 aa17.41■□□□□ 0.38
CAPRIN1-207ENST00000529307 CDKN2BP42772 138 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 BRCC3P46736 316 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 MDH1BQ5I0G3 518 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 DSTYKQ6XUX3 929 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 HASPINQ8TF76 798 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 CNPY3Q9BT09 278 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 hCG_1818297A0A087WSY0 165 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 B3GAT3O94766 335 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 ITGB1P05556 798 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 CD48P09326 243 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 LCP1P13796 627 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 ERMARDQ5T6L9 678 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 ANO7Q6IWH7 933 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 TRPM8Q7Z2W7 1104 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 FAM126BQ8IXS8 530 aa17.4■□□□□ 0.38
CAPRIN1-207ENST00000529307 MAIP1Q8WWC4 291 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms