RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 PNPLA8Q9NP80 782 aa16.51■□□□□ 0.23
CTSB-215ENST00000528965 DNAJC17Q9NVM6 304 aaKnown RBP16.51■□□□□ 0.23
CTSB-215ENST00000528965 HMGXB4Q9UGU5 601 aa16.51■□□□□ 0.23
CTSB-215ENST00000528965 PCDHA5Q9Y5H7 936 aa16.51■□□□□ 0.23
CTSB-215ENST00000528965 AP5Z1O43299 807 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 ADAM23O75077 832 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 HLA-DRAP01903 254 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 CHRM1P11229 460 aaPredicted RBP16.5■□□□□ 0.23
CTSB-215ENST00000528965 KRT13P13646 458 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 HOXB2P14652 356 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 HNRNPLP14866 589 aaKnown RBP eCLIP16.5■□□□□ 0.23
CTSB-215ENST00000528965 CMA1P23946 247 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 HOXD12P35452 270 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 ATP5C1P36542 298 aaKnown RBP16.5■□□□□ 0.23
CTSB-215ENST00000528965 VAMP7P51809 220 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 ZNF252P-AS1Q0IIN9 211 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 INCA1Q0VD86 236 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 ORC1Q13415 861 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 TRIM61Q5EBN2 209 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 SDE2Q6IQ49 451 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 SLC36A4Q6YBV0 504 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 HTR3DQ70Z44 454 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 INTS8Q75QN2 995 aaKnown RBP16.5■□□□□ 0.23
CTSB-215ENST00000528965 RABEPKQ7Z6M1 372 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 SYT12Q8IV01 421 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 RLN3Q8WXF3 142 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 HNRNPABQ99729 332 aaKnown RBP16.5■□□□□ 0.23
CTSB-215ENST00000528965 NT5C1AQ9BXI3 368 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 CYLDQ9NQC7 956 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 WDR35Q9P2L0 1181 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 SCML2Q9UQR0 700 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 TRAF3IP3Q9Y228 551 aa16.5■□□□□ 0.23
CTSB-215ENST00000528965 KMT2BQ9UMN6 2715 aaPredicted RBP16.49■□□□□ 0.23
CTSB-215ENST00000528965 A0A1B0GVL5 298 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 NEDD8-MDP1E9PL57 170 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 CACNG3O60359 315 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 KRT37O76014 449 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 NR2F2P24468 414 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 RPL13P26373 211 aaKnown RBP16.49■□□□□ 0.23
CTSB-215ENST00000528965 PSEN1P49768 467 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 KRT85P78386 507 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 ENPEPQ07075 957 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 EMC10Q5UCC4 262 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 SPOPLQ6IQ16 392 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 KLHDC10Q6PID8 442 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 ARMCX6Q7L4S7 300 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 TMEM25Q86YD3 366 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 JAKMIP2Q96AA8 810 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 ELMO3Q96BJ8 720 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 SPATA32Q96LK8 384 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 CDK5RAP1Q96SZ6 601 aaKnown RBP16.49■□□□□ 0.23
CTSB-215ENST00000528965 BBS2Q9BXC9 721 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 KLF16Q9BXK1 252 aaPredicted RBP16.49■□□□□ 0.23
CTSB-215ENST00000528965 NIF3L1Q9GZT8 377 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 MARK1Q9P0L2 795 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 THADAQ6YHU6 1953 aa16.49■□□□□ 0.23
CTSB-215ENST00000528965 NUP205Q92621 2012 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 ANTXRLA6NF34 631 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 PATE3B3GLJ2 98 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 CYP26A1O43174 497 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 ZNF217O75362 1048 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 BEST1O76090 585 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 CSRP1P21291 193 aaKnown RBP16.48■□□□□ 0.23
CTSB-215ENST00000528965 ACO1P21399 889 aaKnown RBP16.48■□□□□ 0.23
CTSB-215ENST00000528965 NTSR1P30989 418 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 SYKP43405 635 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 NFIL3Q16649 462 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 MAP7D1Q3KQU3 841 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 SH3PXD2AQ5TCZ1 1133 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 CLEC20AQ6ZU45 233 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 FAM186BQ8IYM0 893 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 TMEFF1Q8IYR6 380 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 TTC39CQ8N584 583 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 C12orf29Q8N999 325 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 CCDC34Q96HJ3 373 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 ZDHHC4Q9NPG8 344 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 DNMT3LQ9UJW3 386 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 STARD13Q9Y3M8 1113 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 ABCA7Q8IZY2 2146 aa16.48■□□□□ 0.23
CTSB-215ENST00000528965 RHOBTB3O94955 611 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 RALAP11233 206 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 CEACAM1P13688 526 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 TYRP14679 529 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 PSMC2P35998 433 aaKnown RBP16.47■□□□□ 0.23
CTSB-215ENST00000528965 PLA2G4AP47712 749 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 GCLMP48507 274 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 ATXN3P54252 364 aaPredicted RBP16.47■□□□□ 0.23
CTSB-215ENST00000528965 IRX4P78413 519 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 RPL6Q02878 288 aaKnown RBP16.47■□□□□ 0.23
CTSB-215ENST00000528965 PKP1Q13835 747 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 UAP1L1Q3KQV9 507 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 C10orf120Q5SQS8 335 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 CHPFQ8IZ52 775 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 CEP76Q8TAP6 659 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 CYFIP2Q96F07 1278 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 SLC32A1Q9H598 525 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 CALCOCO1Q9P1Z2 691 aa16.47■□□□□ 0.23
CTSB-215ENST00000528965 MBD1Q9UIS9 605 aaPredicted RBP16.47■□□□□ 0.23
CTSB-215ENST00000528965 NAGPAQ9UK23 515 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms