RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	GRAMD4	Q6IC98	578 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	SCARA5	Q6ZMJ2	495 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	TPGS1	Q6ZTW0	290 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	HTR3D	Q70Z44	454 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	MIB1	Q86YT6	1006 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CHPF	Q8IZ52	775 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	TERB1	Q8NA31	727 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CEP76	Q8TAP6	659 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	PARD3B	Q8TEW8	1205 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	XPO6	Q96QU8	1125 aa	Known RBP	12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	SMO	Q99835	787 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	KLF16	Q9BXK1	252 aa	Predicted RBP	12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	VRTN	Q9H8Y1	702 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	TLR8	Q9NR97	1041 aa	Known RBP	12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	KRT82	Q9NSB4	513 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	DNAJC17	Q9NVM6	304 aa	Known RBP	12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CALCOCO1	Q9P1Z2	691 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	CGN	Q9P2M7	1197 aa	Known RBP	12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	STARD13	Q9Y3M8	1113 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	UBE4B	O95155	1302 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	PTPRD	P23468	1912 aa		12.03	□□□□□ -0.48
PTP4A2-211	ENST00000528840	PVALEF	A0A1B0GWK0	134 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840		A0A1W2PQF6	199 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	NEDD8-MDP1	E9PL57	170 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	TLR5	O60602	858 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	VNN1	O95497	513 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	SERPINF2	P08697	491 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	TYR	P14679	529 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	ATP5C1	P36542	298 aa	Known RBP	12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	NDST1	P52848	882 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	AP3M2	P53677	418 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	DLG4	P78352	724 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	EHHADH	Q08426	723 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	PIP4P1	Q86T03	277 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	C12orf56	Q8IXR9	622 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	CRYBG2	Q8N1P7	616 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	C12orf29	Q8N999	325 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	TRIML1	Q8N9V2	468 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	ZMIZ2	Q8NF64	920 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	OR2I1P	Q8NGU4	316 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	SLC2A14	Q8TDB8	520 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	IPO4	Q8TEX9	1081 aa	Known RBP	12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	GATA6	Q92908	595 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	BBS2	Q9BXC9	721 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	FBXO44	Q9H4M3	255 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.02	□□□□□ -0.49	2e-17	■■■■■ 65.2
PTP4A2-211	ENST00000528840	WDR35	Q9P2L0	1181 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	CYP8B1	Q9UNU6	501 aa		12.02	□□□□□ -0.49
PTP4A2-211	ENST00000528840	IGHV1OR15-9	A0A0B4J2B8	117 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	FAM92A	A1XBS5	289 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	TMEM8B	A6NDV4	472 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	SRRM3	A6NNA2	597 aa	Predicted RBP	12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	WASH3P	C4AMC7	463 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	PRRT4	C9JH25	899 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	ARHGAP33	O14559	1287 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	GREM1	O60565	184 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	OPHN1	O60890	802 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	NDUFS2	O75306	463 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	ZNF217	O75362	1048 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	P4HA1	P13674	534 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	ADORA2B	P29275	332 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	RDX	P35241	583 aa	Known RBP	12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	FAM193A	P78312	1265 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	CLDN10	P78369	228 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	BMT2	Q1RMZ1	405 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	PEAR1	Q5VY43	1037 aa	Predicted RBP	12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	TOGARAM2	Q6ZUX3	1019 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	SLC41A1	Q8IVJ1	513 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	GRAMD1C	Q8IYS0	662 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	RGL4	Q8IZJ4	473 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	GOLGA5	Q8TBA6	731 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	BHMT	Q93088	406 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	JAKMIP2	Q96AA8	810 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	SLC6A17	Q9H1V8	727 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	CAPN10	Q9HC96	672 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	FAM49B	Q9NUQ9	324 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	OSER1	Q9NX31	292 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	FAM13B	Q9NYF5	915 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	NUDT5	Q9UKK9	219 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	KLK13	Q9UKR3	277 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	RAD54B	Q9Y620	910 aa		12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	MYO18A	Q92614	2054 aa	Known RBP	12.01	□□□□□ -0.49
PTP4A2-211	ENST00000528840	ZFHX4	Q86UP3	3567 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	CHD8	Q9HCK8	2581 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	UPK3BL1	B0FP48	263 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	UPK3BL2	E5RIL1	263 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	MDM4	O15151	490 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	YEATS4	O95619	227 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	RPN1	P04843	607 aa	Known RBP	12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	SYP	P08247	313 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	CISD3	P0C7P0	127 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	NDUFV2	P19404	249 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	MAOB	P27338	520 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	HOXD12	P35452	270 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	PLA2G4A	P47712	749 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	GOLGA8F	Q08AF8	430 aa		12	□□□□□ -0.49
PTP4A2-211	ENST00000528840	GOLGA8DP	Q0D2H9	430 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms