RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ZBTB24O43167 697 aaPredicted RBP9.55□□□□□ -0.88
CMTM1-210ENST00000528441 CYP17A1P05093 508 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 VDRP11473 427 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 PXNP49023 591 aaPredicted RBP9.55□□□□□ -0.88
CMTM1-210ENST00000528441 RGS7P49802 495 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 TUBP50607 506 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 TKTL1P51854 596 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 RAD23BP54727 409 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 BST2Q10589 180 aaKnown RBP9.55□□□□□ -0.88
CMTM1-210ENST00000528441 SIM2Q14190 667 aaPredicted RBP9.55□□□□□ -0.88
CMTM1-210ENST00000528441 DHCR24Q15392 516 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 ARHGAP44Q17R89 818 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 ZNF528Q3MIS6 628 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 C2orf27AQ580R0 203 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 HSP90AA4PQ58FG1 418 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 FSTL4Q6MZW2 842 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 PIGZQ86VD9 579 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 ZC3H3Q8IXZ2 948 aaKnown RBP9.55□□□□□ -0.88
CMTM1-210ENST00000528441 PGBD3Q8N328 593 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 MLKLQ8NB16 471 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 RBBP8NLQ8NC74 664 aaPredicted RBP9.55□□□□□ -0.88
CMTM1-210ENST00000528441 WHAMMQ8TF30 809 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 BHMTQ93088 406 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 XPO6Q96QU8 1125 aaKnown RBP9.55□□□□□ -0.88
CMTM1-210ENST00000528441 HHIPQ96QV1 700 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 DUSP9Q99956 384 aaKnown RBP9.55□□□□□ -0.88
CMTM1-210ENST00000528441 INTS2Q9H0H0 1204 aaKnown RBP9.55□□□□□ -0.88
CMTM1-210ENST00000528441 PDCL3Q9H2J4 239 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 CLSTN2Q9H4D0 955 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 CSNK1G1Q9HCP0 422 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 PNPLA8Q9NP80 782 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 PRMT8Q9NR22 394 aaPredicted RBP9.55□□□□□ -0.88
CMTM1-210ENST00000528441 ARHGEF4Q9NR80 690 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 ST7Q9NRC1 585 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 BCCIPQ9P287 314 aaKnown RBP eCLIP9.55□□□□□ -0.88
CMTM1-210ENST00000528441 RWDD2AQ9UIY3 292 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 DNMT3LQ9UJW3 386 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 SMG5Q9UPR3 1016 aaKnown RBP9.55□□□□□ -0.88
CMTM1-210ENST00000528441 SCML2Q9UQR0 700 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 F5P12259 2224 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 CACNA1IQ9P0X4 2223 aa9.55□□□□□ -0.88
CMTM1-210ENST00000528441 SLC12A8A0AV02 714 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 TBC1D3BA6NDS4 549 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 OTOL1A6NHN0 477 aaPredicted RBP9.54□□□□□ -0.88
CMTM1-210ENST00000528441 PROB1E7EW31 1015 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 TRDMT1O14717 391 aaKnown RBP9.54□□□□□ -0.88
CMTM1-210ENST00000528441 TNFRSF10BO14763 440 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 TBX18O95935 607 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 CYBBP04839 570 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 TCF3P15923 654 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 BRD2P25440 801 aaKnown RBP9.54□□□□□ -0.88
CMTM1-210ENST00000528441 GBP1P32455 592 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 PLA2G4AP47712 749 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 DGKEP52429 567 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 MFAP3P55082 362 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 YWHAGP61981 247 aaKnown RBP eCLIP9.54□□□□□ -0.88
CMTM1-210ENST00000528441 PDE4CQ08493 712 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 ADIGQ0VDE8 80 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 CAMK2BQ13554 666 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 CCINQ13939 588 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 TMEM196Q5HYL7 178 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 LY6G5CQ5SRR4 150 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 ARHGAP17Q68EM7 881 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 NAIF1Q69YI7 327 aaPredicted RBP9.54□□□□□ -0.88
CMTM1-210ENST00000528441 GBP6Q6ZN66 633 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 LONP2Q86WA8 852 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 BBS7Q8IWZ6 715 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 KIAA2013Q8IYS2 634 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 ANKRD52Q8NB46 1076 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 TSTD1Q8NFU3 115 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 RUBCNQ92622 972 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 OTUB2Q96DC9 234 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 PNKPQ96T60 521 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 CRACR2AQ9BSW2 395 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 BBS2Q9BXC9 721 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 ULBP1Q9BZM6 244 aa9.54□□□□□ -0.88
CMTM1-210ENST00000528441 FAM124BQ9H5Z6 455 aaPredicted RBP9.54□□□□□ -0.88
CMTM1-210ENST00000528441 UBE2TQ9NPD8 197 aaPredicted RBP9.54□□□□□ -0.88
CMTM1-210ENST00000528441 XPO1O14980 1071 aaKnown RBP9.53□□□□□ -0.88
CMTM1-210ENST00000528441 THAP12O43422 761 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 MED7O43513 233 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 ALDH1A2O94788 518 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 OLFM2O95897 454 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 ZBED1O96006 694 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 PAEPP09466 180 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 SETSIPP0DME0 302 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 BMP6P22004 513 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 KIF11P52732 1056 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 COG7P83436 770 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 ARID5AQ03989 594 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 DMC1Q14565 340 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 STILQ15468 1287 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 C10orf76Q5T2E6 689 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 GRAMD4Q6IC98 578 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 SDE2Q6IQ49 451 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 SASS6Q6UVJ0 657 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 CCDC186Q7Z3E2 898 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 ARHGEF19Q8IW93 802 aa9.53□□□□□ -0.88
CMTM1-210ENST00000528441 MAML2Q8IZL2 1156 aaPredicted RBP9.53□□□□□ -0.88
CMTM1-210ENST00000528441 CCDC33Q8N5R6 958 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms