RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 USP3Q9Y6I4 520 aa10.12□□□□□ -0.79
CHD7-208ENST00000528280 ANAPC1Q9H1A4 1944 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 HHLA1C9JL84 531 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 EGFP01133 1207 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 APODP05090 189 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 TDGF1P13385 188 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 RARGP13631 454 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 CD44P16070 742 aaKnown RBP10.11□□□□□ -0.79
CHD7-208ENST00000528280 MRPS21P82921 87 aaKnown RBP10.11□□□□□ -0.79
CHD7-208ENST00000528280 ZXDBP98169 803 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 KCNH2Q12809 1159 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 E2F5Q15329 346 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 RHBDF2Q6PJF5 856 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 SYT13Q7L8C5 426 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 WDR5BQ86VZ2 330 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 EHBP1Q8NDI1 1231 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 RIN3Q8TB24 985 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 CHFRQ96EP1 664 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 KLF16Q9BXK1 252 aaPredicted RBP10.11□□□□□ -0.79
CHD7-208ENST00000528280 SRRTQ9BXP5 876 aaKnown RBP10.11□□□□□ -0.79
CHD7-208ENST00000528280 DCLK3Q9C098 648 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 CCSER2Q9H7U1 834 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 RWDD2AQ9UIY3 292 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 NAGPAQ9UK23 515 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 GMEB2Q9UKD1 530 aa10.11□□□□□ -0.79
CHD7-208ENST00000528280 SETXQ7Z333 2677 aaKnown RBP10.11□□□□□ -0.79
CHD7-208ENST00000528280 OBSL1O75147 1896 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 COL4A2P08572 1712 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 K7ESF4 209 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 BIN1O00499 593 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 XPO1O14980 1071 aaKnown RBP10.1□□□□□ -0.79
CHD7-208ENST00000528280 LRP3O75074 770 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 RNF40O75150 1001 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 AFPP02771 609 aaKnown RBP10.1□□□□□ -0.79
CHD7-208ENST00000528280 SETSIPP0DME0 302 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 ADH5P11766 374 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 HOXB3P14651 431 aaPredicted RBP10.1□□□□□ -0.79
CHD7-208ENST00000528280 BMP6P22004 513 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 CHKAP35790 457 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 GRIA2P42262 883 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 BCAT1P54687 386 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 GCNT1Q02742 428 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 SIM2Q14190 667 aaPredicted RBP10.1□□□□□ -0.79
CHD7-208ENST00000528280 CNGA2Q16280 664 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 CT47A1Q5JQC4 288 aaPredicted RBP10.1□□□□□ -0.79
CHD7-208ENST00000528280 C10orf120Q5SQS8 335 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 PM20D1Q6GTS8 502 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 LAIR1Q6GTX8 287 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 Q6ZS52 159 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 ENOSF1Q7L5Y1 443 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 C11orf74Q86VG3 221 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 TRIM59Q8IWR1 403 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 XPO6Q96QU8 1125 aaKnown RBP10.1□□□□□ -0.79
CHD7-208ENST00000528280 LRRC4Q9HBW1 653 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 FBRSL1Q9HCM7 1045 aaKnown RBP10.1□□□□□ -0.79
CHD7-208ENST00000528280 SPHK2Q9NRA0 654 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 OLA1Q9NTK5 396 aaKnown RBP10.1□□□□□ -0.79
CHD7-208ENST00000528280 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.1□□□□□ -0.79
CHD7-208ENST00000528280 DEC1Q9P2X7 70 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 DACH1Q9UI36 760 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 STRIP2Q9ULQ0 834 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 CTNND2Q9UQB3 1225 aa10.1□□□□□ -0.79
CHD7-208ENST00000528280 GPR179Q6PRD1 2367 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 MYH10P35580 1976 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 A0A1W2PQH9 124 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 ZBTB24O43167 697 aaPredicted RBP10.09□□□□□ -0.79
CHD7-208ENST00000528280 HOXC11O43248 304 aaPredicted RBP10.09□□□□□ -0.79
CHD7-208ENST00000528280 ALDH1A2O94788 518 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 APBB3O95704 486 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 ZBED1O96006 694 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 CYP17A1P05093 508 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 RETP07949 1114 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 CD19P15391 556 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 OPRD1P41143 372 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 FNTBP49356 437 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 BST2Q10589 180 aaKnown RBP10.09□□□□□ -0.79
CHD7-208ENST00000528280 LRMPQ12912 555 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 CAMK4Q16566 473 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 TPD52L1Q16890 204 aaPredicted RBP10.09□□□□□ -0.79
CHD7-208ENST00000528280 RAB41Q5JT25 222 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 LCLAT1Q6UWP7 414 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 CLEC17AQ6ZS10 378 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 CEP68Q76N32 757 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 CACNA2D4Q7Z3S7 1137 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 TRMT11Q7Z4G4 463 aaKnown RBP10.09□□□□□ -0.79
CHD7-208ENST00000528280 PIGZQ86VD9 579 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 FAM114A1Q8IWE2 563 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 SCML4Q8N228 414 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 PPM1KQ8N3J5 372 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 RPLP0P6Q8NHW5 317 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 KCTD13Q8WZ19 329 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 LOXL4Q96JB6 756 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 ZFRQ96KR1 1074 aaKnown RBP10.09□□□□□ -0.79
CHD7-208ENST00000528280 RTKNQ9BST9 563 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 EBF1Q9UH73 591 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 SMG5Q9UPR3 1016 aaKnown RBP10.09□□□□□ -0.79
CHD7-208ENST00000528280 PCDHB4Q9Y5E5 795 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 PATJQ8NI35 1801 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 RALGAPA1Q6GYQ0 2036 aa10.09□□□□□ -0.79
CHD7-208ENST00000528280 DCDC2BA2VCK2 349 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms