RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PM20D1Q6GTS8 502 aa34.74■■■■□ 3.15
SSSCA1-205ENST00000527920 LONP2Q86WA8 852 aa34.74■■■■□ 3.15
SSSCA1-205ENST00000527920 BBS7Q8IWZ6 715 aa34.74■■■■□ 3.15
SSSCA1-205ENST00000527920 KAT5Q92993 513 aa34.74■■■■□ 3.15
SSSCA1-205ENST00000527920 INTS2Q9H0H0 1204 aaKnown RBP34.74■■■■□ 3.15
SSSCA1-205ENST00000527920 NUP62CLQ9H1M0 184 aa34.74■■■■□ 3.15
SSSCA1-205ENST00000527920 HOXC11O43248 304 aaPredicted RBP34.73■■■■□ 3.15
SSSCA1-205ENST00000527920 CNR2P34972 360 aa34.73■■■■□ 3.15
SSSCA1-205ENST00000527920 ZNF132P52740 706 aa34.73■■■■□ 3.15
SSSCA1-205ENST00000527920 LY6G5CQ5SRR4 150 aa34.73■■■■□ 3.15
SSSCA1-205ENST00000527920 RUBCNQ92622 972 aa34.73■■■■□ 3.15
SSSCA1-205ENST00000527920 ACDQ96AP0 544 aa34.73■■■■□ 3.15
SSSCA1-205ENST00000527920 LSM7Q9UK45 103 aaKnown RBP34.73■■■■□ 3.15
SSSCA1-205ENST00000527920 CCDC163A0A0D9SF12 145 aa34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 PALM2-AKAP2B1ALY0 433 aaPredicted RBP34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 TKTL1P51854 596 aa34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 GAD2Q05329 585 aa34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 CNGA2Q16280 664 aa34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 RRAGAQ7L523 313 aa34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 ARHGEF19Q8IW93 802 aa34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 KCTD13Q8WZ19 329 aa34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 WBP2Q969T9 261 aa34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 SPHK2Q9NRA0 654 aa34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 LMBRD1Q9NUN5 540 aa34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 SMG5Q9UPR3 1016 aaKnown RBP34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 CNTN6Q9UQ52 1028 aa34.72■■■■□ 3.15
SSSCA1-205ENST00000527920 CFAP54Q96N23 3096 aa34.71■■■■□ 3.15
SSSCA1-205ENST00000527920 TULP2O00295 520 aa34.71■■■■□ 3.15
SSSCA1-205ENST00000527920 ZBED1O96006 694 aa34.71■■■■□ 3.15
SSSCA1-205ENST00000527920 IRF1P10914 325 aa34.71■■■■□ 3.15
SSSCA1-205ENST00000527920 SYT13Q7L8C5 426 aa34.71■■■■□ 3.15
SSSCA1-205ENST00000527920 IRF2BP1Q8IU81 584 aa34.71■■■■□ 3.15
SSSCA1-205ENST00000527920 SCML4Q8N228 414 aa34.71■■■■□ 3.15
SSSCA1-205ENST00000527920 RBBP8NLQ8NC74 664 aaPredicted RBP34.71■■■■□ 3.15
SSSCA1-205ENST00000527920 TFAP2BQ92481 460 aa34.71■■■■□ 3.15
SSSCA1-205ENST00000527920 PNKPQ96T60 521 aa34.71■■■■□ 3.15
SSSCA1-205ENST00000527920 WDR3Q9UNX4 943 aaKnown RBP eCLIP34.71■■■■□ 3.15
SSSCA1-205ENST00000527920 SLC8A2Q9UPR5 921 aa34.71■■■■□ 3.15
SSSCA1-205ENST00000527920 FNTBP49356 437 aa34.7■■■■□ 3.15
SSSCA1-205ENST00000527920 DMWDQ09019 674 aa34.7■■■■□ 3.15
SSSCA1-205ENST00000527920 SMYD5Q6GMV2 418 aa34.7■■■■□ 3.15
SSSCA1-205ENST00000527920 WDR5BQ86VZ2 330 aa34.7■■■■□ 3.15
SSSCA1-205ENST00000527920 CAMKK1Q8N5S9 505 aa34.7■■■■□ 3.15
SSSCA1-205ENST00000527920 FAM81BQ96LP2 452 aa34.7■■■■□ 3.15
SSSCA1-205ENST00000527920 KREMEN1Q96MU8 473 aa34.7■■■■□ 3.15
SSSCA1-205ENST00000527920 LRRC4Q9HBW1 653 aa34.7■■■■□ 3.15
SSSCA1-205ENST00000527920 DACH1Q9UI36 760 aa34.7■■■■□ 3.15
SSSCA1-205ENST00000527920 ZNF292O60281 2723 aa34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 A0A0A0MRY4 1105 aa34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 K7EQS6 105 aa34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 RNF225M0QZC1 329 aaPredicted RBP34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 ERCC5P28715 1186 aaPredicted RBP34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 COG7P83436 770 aa34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 BTBD8Q5XKL5 378 aa34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 ENOSF1Q7L5Y1 443 aa34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 ETFBKMTQ8IXQ9 262 aa34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 RPLP0P6Q8NHW5 317 aa34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 GBP4Q96PP9 640 aa34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 ULBP1Q9BZM6 244 aa34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 THAP9Q9H5L6 903 aa34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 NUDT5Q9UKK9 219 aa34.69■■■■□ 3.14
SSSCA1-205ENST00000527920 GTPBP10A4D1E9 387 aaKnown RBP34.68■■■■□ 3.14
SSSCA1-205ENST00000527920 MDM4O15151 490 aa34.68■■■■□ 3.14
SSSCA1-205ENST00000527920 YWHAGP61981 247 aaKnown RBP eCLIP34.68■■■■□ 3.14
SSSCA1-205ENST00000527920 DPCR1Q3MIW9 517 aa34.68■■■■□ 3.14
SSSCA1-205ENST00000527920 PREPLQ4J6C6 727 aaPredicted RBP34.68■■■■□ 3.14
SSSCA1-205ENST00000527920 Q6ZNB5 142 aa34.68■■■■□ 3.14
SSSCA1-205ENST00000527920 BHLHA9Q7RTU4 235 aa34.68■■■■□ 3.14
SSSCA1-205ENST00000527920 C12orf40Q86WS4 652 aa34.68■■■■□ 3.14
SSSCA1-205ENST00000527920 UBA3Q8TBC4 463 aa34.68■■■■□ 3.14
SSSCA1-205ENST00000527920 USP33Q8TEY7 942 aa34.68■■■■□ 3.14
SSSCA1-205ENST00000527920 ZSWIM1Q9BR11 485 aa34.68■■■■□ 3.14
SSSCA1-205ENST00000527920 MARK1Q9P0L2 795 aa34.68■■■■□ 3.14
SSSCA1-205ENST00000527920 GRIA2P42262 883 aa34.67■■■■□ 3.14
SSSCA1-205ENST00000527920 CT47A1Q5JQC4 288 aaPredicted RBP34.67■■■■□ 3.14
SSSCA1-205ENST00000527920 TMEM25Q86YD3 366 aa34.67■■■■□ 3.14
SSSCA1-205ENST00000527920 SLC35F5Q8WV83 523 aa34.67■■■■□ 3.14
SSSCA1-205ENST00000527920 CNGB3Q9NQW8 809 aa34.67■■■■□ 3.14
SSSCA1-205ENST00000527920 ZNF510Q9Y2H8 683 aa34.67■■■■□ 3.14
SSSCA1-205ENST00000527920 STC2O76061 302 aa34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 KAT7O95251 611 aa34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 APODP05090 189 aa34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 SLC6A11P48066 632 aa34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 ADIGQ0VDE8 80 aa34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 TPD52L1Q16890 204 aaPredicted RBP34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 TRIM65Q6PJ69 517 aa34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 MIB1Q86YT6 1006 aa34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 FAM114A1Q8IWE2 563 aa34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 SIX6OS1Q8N1H7 587 aa34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 PHTF2Q8N3S3 785 aa34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 IPO9Q96P70 1041 aaKnown RBP34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 ARHGEF4Q9NR80 690 aa34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 OLA1Q9NTK5 396 aaKnown RBP34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 STRIP2Q9ULQ0 834 aa34.66■■■■□ 3.14
SSSCA1-205ENST00000527920 BRD2P25440 801 aaKnown RBP34.65■■■■□ 3.14
SSSCA1-205ENST00000527920 MRPS21P82921 87 aaKnown RBP34.65■■■■□ 3.14
SSSCA1-205ENST00000527920 MEA1Q16626 185 aa34.65■■■■□ 3.14
SSSCA1-205ENST00000527920 HSF5Q4G112 596 aaPredicted RBP34.65■■■■□ 3.14
SSSCA1-205ENST00000527920 SECISBP2LQ93073 1101 aaKnown RBP34.65■■■■□ 3.14
SSSCA1-205ENST00000527920 HSFY1Q96LI6 401 aa34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 366 ms