RNA–Protein interactions for RNA: ENST00000527744.5

PUF60-211, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 1,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-211ENST00000527744 GPR174Q9BXC1 333 aa13.68□□□□□ -0.22
PUF60-211ENST00000527744 MTMR12Q9C0I1 747 aa13.68□□□□□ -0.22
PUF60-211ENST00000527744 MIR1-1HGQ9H1L0 117 aa13.68□□□□□ -0.22
PUF60-211ENST00000527744 ITM2CQ9NQX7 267 aa13.68□□□□□ -0.22
PUF60-211ENST00000527744 DNAJC17Q9NVM6 304 aaKnown RBP13.68□□□□□ -0.22
PUF60-211ENST00000527744 RBAKQ9NYW8 714 aaPredicted RBP13.68□□□□□ -0.22
PUF60-211ENST00000527744 USP36Q9P275 1121 aaKnown RBP13.68□□□□□ -0.22
PUF60-211ENST00000527744 LIMCH1Q9UPQ0 1083 aa13.68□□□□□ -0.22
PUF60-211ENST00000527744 NME7Q9Y5B8 376 aa13.68□□□□□ -0.22
PUF60-211ENST00000527744 CKAP5Q14008 2032 aa13.68□□□□□ -0.22
PUF60-211ENST00000527744 MYLKQ15746 1914 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 METTL12A8MUP2 240 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 KCNJ18B7U540 433 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 WASH3PC4AMC7 463 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
PUF60-211ENST00000527744 TNFSF14O43557 240 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 YWHAQP27348 245 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 KCNA1Q09470 495 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 MYO1EQ12965 1108 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 RILPL1Q5EBL4 403 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 MDH1BQ5I0G3 518 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 HECTD3Q5T447 861 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 DCAF12L1Q5VU92 463 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 SNX30Q5VWJ9 437 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 LARP1BQ659C4 914 aaKnown RBP13.67□□□□□ -0.22
PUF60-211ENST00000527744 PDZD8Q8NEN9 1154 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 SCFD1Q8WVM8 642 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 OVCA2Q8WZ82 227 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 RAD54LQ92698 747 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 CALML4Q96GE6 196 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 HPDLQ96IR7 371 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 PDE11AQ9HCR9 933 aa13.67□□□□□ -0.22
PUF60-211ENST00000527744 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.67□□□□□ -0.22
PUF60-211ENST00000527744 PTPN13Q12923 2485 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 GREM1O60565 184 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 LDHAP00338 332 aaKnown RBP13.66□□□□□ -0.22
PUF60-211ENST00000527744 TMEM191BP0C7N4 346 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 CISD3P0C7P0 127 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 HLA-EP13747 358 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 TYRP14679 529 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 GARTP22102 1010 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 EIF2S3P41091 472 aaKnown RBP13.66□□□□□ -0.22
PUF60-211ENST00000527744 IFRD2Q12894 506 aaPredicted RBP13.66□□□□□ -0.22
PUF60-211ENST00000527744 SUZ12Q15022 739 aaKnown RBP13.66□□□□□ -0.22
PUF60-211ENST00000527744 FUT11Q495W5 492 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 HS2ST1Q7LGA3 356 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 SFR1Q86XK3 245 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 NUP93Q8N1F7 819 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 FBXO32Q969P5 355 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 XPO6Q96QU8 1125 aaKnown RBP13.66□□□□□ -0.22
PUF60-211ENST00000527744 TRIM9Q9C026 710 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 ZNF518BQ9C0D4 1074 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 MKRN2Q9H000 416 aaKnown RBP13.66□□□□□ -0.22
PUF60-211ENST00000527744 CCSER2Q9H7U1 834 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 MARK1Q9P0L2 795 aa13.66□□□□□ -0.22
PUF60-211ENST00000527744 CHORDC1Q9UHD1 332 aaPredicted RBP13.66□□□□□ -0.22
PUF60-211ENST00000527744 EIF2B4Q9UI10 523 aaKnown RBP13.66□□□□□ -0.22
PUF60-211ENST00000527744 PTPRJQ12913 1337 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 TP53BP1Q12888 1972 aaPredicted RBP13.65□□□□□ -0.22
PUF60-211ENST00000527744 A0A1B0GVT2 93 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 GOLGA8IPA6NC78 632 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 GOLGA8JA6NMD2 632 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 NEDD8-MDP1E9PL57 170 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 PLK4O00444 970 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 TLX3O43711 291 aaPredicted RBP13.65□□□□□ -0.22
PUF60-211ENST00000527744 RTN3O95197 1032 aaPredicted RBP13.65□□□□□ -0.22
PUF60-211ENST00000527744 IGLV3-19P01714 112 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 PTPN1P18031 435 aaKnown RBP13.65□□□□□ -0.22
PUF60-211ENST00000527744 GNL1P36915 607 aaPredicted RBP13.65□□□□□ -0.22
PUF60-211ENST00000527744 UBA7P41226 1012 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 TUBP50607 506 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 TPMTP51580 245 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 L1TD1Q5T7N2 865 aaKnown RBP13.65□□□□□ -0.22
PUF60-211ENST00000527744 DHRS13Q6UX07 377 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 HTR3DQ70Z44 454 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 TMPRSS12Q86WS5 348 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 OR5B17Q8NGF7 314 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 LARP4BQ92615 738 aaKnown RBP13.65□□□□□ -0.22
PUF60-211ENST00000527744 ANKRD36BP1Q96IX9 119 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 BBS2Q9BXC9 721 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 ELOVL4Q9GZR5 314 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 INTS13Q9NVM9 706 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 IL37Q9NZH6 218 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 WDR35Q9P2L0 1181 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 EXOC7Q9UPT5 735 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 SLCO1B1Q9Y6L6 691 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 STON1Q9Y6Q2 735 aa13.65□□□□□ -0.22
PUF60-211ENST00000527744 J3QKU1 62 aa13.64□□□□□ -0.23
PUF60-211ENST00000527744 CLDN5O00501 218 aa13.64□□□□□ -0.23
PUF60-211ENST00000527744 ZDHHC11BP0C7U3 371 aa13.64□□□□□ -0.23
PUF60-211ENST00000527744 IRF1P10914 325 aa13.64□□□□□ -0.23
PUF60-211ENST00000527744 OXTRP30559 389 aa13.64□□□□□ -0.23
PUF60-211ENST00000527744 GRK6P43250 576 aa13.64□□□□□ -0.23
PUF60-211ENST00000527744 CSNK1EP49674 416 aaKnown RBP13.64□□□□□ -0.23
PUF60-211ENST00000527744 ENPP2Q13822 863 aa13.64□□□□□ -0.23
PUF60-211ENST00000527744 KIF19Q2TAC6 998 aa13.64□□□□□ -0.23
PUF60-211ENST00000527744 PCSK4Q6UW60 755 aa13.64□□□□□ -0.23
PUF60-211ENST00000527744 LRRC69Q6ZNQ3 347 aa13.64□□□□□ -0.23
PUF60-211ENST00000527744 KRI1Q8N9T8 703 aaKnown RBP13.64□□□□□ -0.23
PUF60-211ENST00000527744 SCAMP5Q8TAC9 235 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms