RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	HSPA9	P38646	679 aa	Known RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	ALDH7A1	P49419	539 aa	Known RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	SCNN1G	P51170	649 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	CLCNKB	P51801	687 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	VCP	P55072	806 aa	Known RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	CDH6	P55285	790 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	BCAR1	P56945	870 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	RPL10A	P62906	217 aa	Known RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	MRPS5	P82675	430 aa	Known RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	ROR1	Q01973	937 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	KRT17	Q04695	432 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	ADCY2	Q08462	1091 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	ILF2	Q12905	390 aa	Known RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	NR1H3	Q13133	447 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	ZNF211	Q13398	564 aa	Predicted RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	XRCC4	Q13426	336 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	MORF4L2	Q15014	288 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	CCDC14	Q49A88	953 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	INTS6L	Q5JSJ4	861 aa	Known RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	C6orf118	Q5T5N4	469 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	CYP4A22	Q5TCH4	519 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	DUPD1	Q68J44	220 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	SCYL2	Q6P3W7	929 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	OLFML1	Q6UWY5	402 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	LEKR1	Q6ZMV7	388 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	BBS12	Q6ZW61	710 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	ANKS3	Q6ZW76	656 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	CENPU	Q71F23	418 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	ANKRD33	Q7Z3H0	272 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	LRRC49	Q8IUZ0	686 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	RIBC1	Q8N443	379 aa	Predicted RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	CMAS	Q8NFW8	434 aa	Predicted RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	GABPB2	Q8TAK5	448 aa	Predicted RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	FAM76A	Q8TAV0	307 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	UBA3	Q8TBC4	463 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	RNF139	Q8WU17	664 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	FAM172A	Q8WUF8	416 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	RXFP2	Q8WXD0	754 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	ALG3	Q92685	438 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	KRT35	Q92764	455 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	NKD2	Q969F2	451 aa	Predicted RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	CFAP57	Q96MR6	1250 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	DDX23	Q9BUQ8	820 aa	Known RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	ROPN1B	Q9BZX4	212 aa	Predicted RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	DCLK3	Q9C098	648 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	MCOLN1	Q9GZU1	580 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	KLC2	Q9H0B6	622 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	SDCBP2	Q9H190	292 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	MTIF3	Q9H2K0	278 aa	Known RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	RETREG1	Q9H6L5	497 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	CNOT10	Q9H9A5	744 aa	Known RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	ROPN1	Q9HAT0	212 aa	Predicted RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	PCDH9	Q9HC56	1237 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	NGRN	Q9NPE2	291 aa	Known RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	PAK6	Q9NQU5	681 aa	Predicted RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	ABCC13	Q9NSE7	274 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	TRMT13	Q9NUP7	481 aa	Known RBP	6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	FAM49B	Q9NUQ9	324 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	FNIP2	Q9P278	1114 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	PAK5	Q9P286	719 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	PRKAG2	Q9UGJ0	569 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	ANAPC5	Q9UJX4	755 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	OGDHL	Q9ULD0	1010 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	NFU1	Q9UMS0	254 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	SHOC2	Q9UQ13	582 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	INPP5F	Q9Y2H2	1132 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	FAN1	Q9Y2M0	1017 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	PTPN22	Q9Y2R2	807 aa		6.53	□□□□□ -1.36
PABPC4-222	ENST00000527718	CLUH	O75153	1309 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	HTT	P42858	3142 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	RALGAPA2	Q2PPJ7	1873 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	SCN10A	Q9Y5Y9	1956 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	hCG_1818297	A0A087WSY0	165 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	ABHD14A-ACY1	A0A1B0GW23	586 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	TCRBV5S1A1T	A0A578	114 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	CASTOR2	A6NHX0	329 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718		C9IYK1	514 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718		F8VP50	259 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	PTGES	O14684	152 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	OAZ2	O95190	189 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	ZBED1	O96006	694 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	POMC	P01189	267 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	KRT14	P02533	472 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	AMH	P03971	560 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	VSIG8	P0DPA2	414 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	RARA	P10276	462 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	LCP1	P13796	627 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	MIP	P30301	263 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	GBP2	P32456	591 aa	Predicted RBP	6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	PPM1A	P35813	382 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	CDKN2B	P42772	138 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	MAGEA11	P43364	429 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	OR1G1	P47890	313 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	TUFM	P49411	452 aa	Known RBP	6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	CDK7	P50613	346 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	GUCY2F	P51841	1108 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	TKTL1	P51854	596 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	PMS2	P54278	862 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	PLTP	P55058	493 aa		6.52	□□□□□ -1.37
PABPC4-222	ENST00000527718	ARL4C	P56559	192 aa		6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms