RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 NAIF1Q69YI7 327 aaPredicted RBP27.7■■■□□ 2.02
TSPAN4-217ENST00000527644 RHBDF2Q6PJF5 856 aa27.7■■■□□ 2.02
TSPAN4-217ENST00000527644 TSSK4Q6SA08 328 aa27.7■■■□□ 2.02
TSPAN4-217ENST00000527644 HTR3DQ70Z44 454 aa27.7■■■□□ 2.02
TSPAN4-217ENST00000527644 NELL1Q92832 810 aa27.7■■■□□ 2.02
TSPAN4-217ENST00000527644 ZSWIM1Q9BR11 485 aa27.7■■■□□ 2.02
TSPAN4-217ENST00000527644 NUDT5Q9UKK9 219 aa27.7■■■□□ 2.02
TSPAN4-217ENST00000527644 MBD3O95983 291 aa27.69■■■□□ 2.02
TSPAN4-217ENST00000527644 ADH1CP00326 375 aa27.69■■■□□ 2.02
TSPAN4-217ENST00000527644 EGFP01133 1207 aa27.69■■■□□ 2.02
TSPAN4-217ENST00000527644 IRF1P10914 325 aa27.69■■■□□ 2.02
TSPAN4-217ENST00000527644 BRD2P25440 801 aaKnown RBP27.69■■■□□ 2.02
TSPAN4-217ENST00000527644 ULBP1Q9BZM6 244 aa27.69■■■□□ 2.02
TSPAN4-217ENST00000527644 ZSCAN32Q9NX65 697 aa27.69■■■□□ 2.02
TSPAN4-217ENST00000527644 PCDHGA2Q9Y5H1 932 aa27.69■■■□□ 2.02
TSPAN4-217ENST00000527644 DMDP11532 3685 aa27.69■■■□□ 2.02
TSPAN4-217ENST00000527644 GFRA3O60609 400 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 PAPSS2O95340 614 aaPredicted RBP27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 TDGF1P13385 188 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 KRT5P13647 590 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 OPRD1P41143 372 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 NRLP54845 237 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 YWHAGP61981 247 aaKnown RBP eCLIP27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 SATB1Q01826 763 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 GAB4Q2WGN9 574 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 BBS7Q8IWZ6 715 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 SLC35F5Q8WV83 523 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 WBP2Q969T9 261 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 TUBGCP2Q9BSJ2 902 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 NDST4Q9H3R1 872 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 APEX2Q9UBZ4 518 aa27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 LSM7Q9UK45 103 aaKnown RBP27.68■■■□□ 2.02
TSPAN4-217ENST00000527644 PRR23AA6NEV1 266 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 M0QYV0 167 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 MDM4O15151 490 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 GREM1O60565 184 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 ATG13O75143 517 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 PRKCSHP14314 528 aaPredicted RBP27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 PON1P27169 355 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 ADIGQ0VDE8 80 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 VWA3BQ502W6 1294 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 SMYD5Q6GMV2 418 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 SIX6OS1Q8N1H7 587 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 SCML4Q8N228 414 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 ZBTB44Q8NCP5 570 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 ENOX1Q8TC92 643 aaKnown RBP27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 ATRIPQ8WXE1 791 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 SECISBP2LQ93073 1101 aaKnown RBP27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 CNGB3Q9NQW8 809 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 FANCMQ8IYD8 2048 aa27.67■■■□□ 2.02
TSPAN4-217ENST00000527644 CALCAP01258 141 aa27.66■■■□□ 2.02
TSPAN4-217ENST00000527644 ADH5P11766 374 aa27.66■■■□□ 2.02
TSPAN4-217ENST00000527644 GAD2Q05329 585 aa27.66■■■□□ 2.02
TSPAN4-217ENST00000527644 HSP90AA4PQ58FG1 418 aa27.66■■■□□ 2.02
TSPAN4-217ENST00000527644 LY6G5CQ5SRR4 150 aa27.66■■■□□ 2.02
TSPAN4-217ENST00000527644 GJB7Q6PEY0 223 aa27.66■■■□□ 2.02
TSPAN4-217ENST00000527644 SASS6Q6UVJ0 657 aa27.66■■■□□ 2.02
TSPAN4-217ENST00000527644 ASCL5Q7RTU5 278 aa27.66■■■□□ 2.02
TSPAN4-217ENST00000527644 CCDC26Q8TAB7 109 aa27.66■■■□□ 2.02
TSPAN4-217ENST00000527644 SAMSN1Q9NSI8 373 aaKnown RBP27.66■■■□□ 2.02
TSPAN4-217ENST00000527644 VPS13AQ96RL7 3174 aa27.66■■■□□ 2.02
TSPAN4-217ENST00000527644 CHURC1-FNTBB4DL54 471 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 KCNJ18B7U540 433 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 RNF40O75150 1001 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 EIF2DP41214 584 aaKnown RBP27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 COG7P83436 770 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 KCNJ12Q14500 433 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 MIIPQ5JXC2 388 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 PMF1Q6P1K2 205 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 RSRC2Q7L4I2 434 aaKnown RBP27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 BHLHA9Q7RTU4 235 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 MIB1Q86YT6 1006 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 HSFY1Q96LI6 401 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 SPHK2Q9NRA0 654 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 RASAL2Q9UJF2 1139 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 NFE2L3Q9Y4A8 694 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 USP34Q70CQ2 3546 aa27.65■■■□□ 2.02
TSPAN4-217ENST00000527644 MED7O43513 233 aa27.64■■■□□ 2.02
TSPAN4-217ENST00000527644 LCP1P13796 627 aa27.64■■■□□ 2.02
TSPAN4-217ENST00000527644 EEF1GP26641 437 aaKnown RBP27.64■■■□□ 2.02
TSPAN4-217ENST00000527644 EFEMP1Q12805 493 aa27.64■■■□□ 2.02
TSPAN4-217ENST00000527644 ARHGAP44Q17R89 818 aa27.64■■■□□ 2.02
TSPAN4-217ENST00000527644 TCP11X2Q5H9J9 407 aa27.64■■■□□ 2.02
TSPAN4-217ENST00000527644 BTBD8Q5XKL5 378 aa27.64■■■□□ 2.02
TSPAN4-217ENST00000527644 NDRG1Q92597 394 aaKnown RBP27.64■■■□□ 2.02
TSPAN4-217ENST00000527644 EZH1Q92800 747 aaPredicted RBP27.64■■■□□ 2.02
TSPAN4-217ENST00000527644 ANO10Q9NW15 660 aa27.64■■■□□ 2.02
TSPAN4-217ENST00000527644 STRIP2Q9ULQ0 834 aa27.64■■■□□ 2.02
TSPAN4-217ENST00000527644 HOXC11O43248 304 aaPredicted RBP27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 LILRB5O75023 590 aa27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 STC2O76061 302 aa27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 LMNAP02545 664 aaKnown RBP27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 RGS7P49802 495 aa27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 APBA1Q02410 837 aa27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 MEA1Q16626 185 aa27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 CCDC183Q5T5S1 534 aa27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 PKN3Q6P5Z2 889 aa27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 PNKPQ96T60 521 aa27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 SIX2Q9NPC8 291 aa27.63■■■□□ 2.01
TSPAN4-217ENST00000527644 OLA1Q9NTK5 396 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms