RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 DAB1O75553 588 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 APOC2P02655 101 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 IVDP26440 423 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 ARSEP51690 589 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 DSC1Q08554 894 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 OASLQ15646 514 aaKnown RBP16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 SLC25A52Q3SY17 297 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 ERMARDQ5T6L9 678 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 FAM171BQ6P995 826 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 STRADAQ7RTN6 431 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 ZNF280BQ86YH2 543 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 ABI1Q8IZP0 508 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 DEFB106AQ8N104 65 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 SLC35B2Q8TB61 432 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 SEPT8Q92599 483 aa16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 SNRNP25Q9BV90 132 aaKnown RBP16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 ELAC1Q9H777 363 aaKnown RBP16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 TDRD15B5MCY1 1934 aaKnown RBP16.9■□□□□ 0.3
SNRNP35-204ENST00000527158 DDHD2O94830 711 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 ITGB1P05556 798 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 TFE3P19532 575 aaPredicted RBP16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 KLRC2P26717 231 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 NOS2P35228 1153 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 NDUFV1P49821 464 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 EIF3BP55884 814 aaKnown RBP16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 TSPY1Q01534 308 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 MTFR1Q15390 333 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 VSIG1Q86XK7 387 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 DBF4BQ8NFT6 615 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 NDRG1Q92597 394 aaKnown RBP16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 MYLPFQ96A32 169 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 KCNK16Q96T55 309 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 CNGB3Q9NQW8 809 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 TBC1D13Q9NVG8 400 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 SAE1Q9UBE0 346 aaPredicted RBP16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 OGDHLQ9ULD0 1010 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 STAP1Q9ULZ2 295 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 PCDHB8Q9UN66 801 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 PCDHB7Q9Y5E2 793 aa16.89■□□□□ 0.3
SNRNP35-204ENST00000527158 SGK1O00141 431 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 ENPP3O14638 875 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 PQBP1O60828 265 aaKnown RBP16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 CCL5P13501 91 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 OR1G1P47890 313 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 ITGA8P53708 1063 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 YWHAHQ04917 246 aaPredicted RBP16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 MMRN1Q13201 1228 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 PLEKHG4Q58EX7 1191 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 DCAF6Q58WW2 860 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 ZC3H12AQ5D1E8 599 aaKnown RBP16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 KCTD16Q68DU8 428 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 COLGALT2Q8IYK4 626 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 RNF157Q96PX1 679 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 TMEM121Q9BTD3 319 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 PABPC3Q9H361 631 aaKnown RBP16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 POPDC2Q9HBU9 364 aa16.89■□□□□ 0.29
SNRNP35-204ENST00000527158 TRAPPC3O43617 180 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 RARGP13631 454 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 SULT1E1P49888 294 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 RAB41Q5JT25 222 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 SH2D3CQ8N5H7 860 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 P3H4Q92791 437 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 APBB2Q92870 758 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 ULBP1Q9BZM6 244 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 PCDH18Q9HCL0 1135 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 CSNK1G1Q9HCP0 422 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 GPATCH2LQ9NWQ4 482 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 H0YGN5 161 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 TMEM189-UBE2V1I3L0A0 370 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 CAPN9O14815 690 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 MCF2LO15068 1137 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 P3H1Q32P28 736 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 IZUMO3Q5VZ72 239 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 CROCCP2Q86T23 111 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 ZMIZ2Q8NF64 920 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 RSAD2Q8WXG1 361 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 ZNF670Q9BS34 389 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 LRFN2Q9ULH4 789 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 NFS1Q9Y697 457 aa16.88■□□□□ 0.29
SNRNP35-204ENST00000527158 ZNF487B1APH4 448 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 F8W810 466 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 NDC80O14777 642 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 FAM107AO95990 144 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 IFNB1P01574 187 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 BDNFP23560 247 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 ATP1A2P50993 1020 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 DAOAP59103 153 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 EIF3EP60228 445 aaKnown RBP16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 ANKRD20A8PQ5CZ79 823 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 PPP6R3Q5H9R7 873 aaPredicted RBP16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 DENND2CQ68D51 928 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 RHBDF2Q6PJF5 856 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 CCDC25Q86WR0 208 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 OR10T2Q8NGX3 314 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 SLC2A13Q96QE2 648 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 DHX35Q9H5Z1 703 aaKnown RBP16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 APOL1O14791 398 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 TP73O15350 636 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 TADA2AO75478 443 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 ZBED1O96006 694 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms