RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 RBAKQ9NYW8 714 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 MYO18BQ8IUG5 2567 aa17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 TBCAO75347 108 aaKnown RBP17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 TACC1O75410 805 aa17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 LDHAP00338 332 aaKnown RBP17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 ITPKBP27987 946 aa17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 SDE2Q6IQ49 451 aa17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 TMPRSS12Q86WS5 348 aa17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 PIP4K2CQ8TBX8 421 aa17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 RHBDD1Q8TEB9 315 aa17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 ELOVL4Q9GZR5 314 aa17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 PCED1AQ9H1Q7 454 aa17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 PRDM16Q9HAZ2 1276 aa17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 DNAJC17Q9NVM6 304 aaKnown RBP17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 RAD54BQ9Y620 910 aa17.25■□□□□ 0.35
CHMP4A-203ENST00000527154 PTPRJQ12913 1337 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 FAM149AA5PLN7 773 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 PCDHGA12O60330 932 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 YWHAQP27348 245 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 CYP27A1Q02318 531 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 ANO4Q32M45 955 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 FUT11Q495W5 492 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 HECTD3Q5T447 861 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 DCAF12L1Q5VU92 463 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 ZNF605Q86T29 641 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 NUP93Q8N1F7 819 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 SAAL1Q96ER3 474 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 HPDLQ96IR7 371 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 GPR174Q9BXC1 333 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 TRIM9Q9C026 710 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 PDE11AQ9HCR9 933 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 INTS13Q9NVM9 706 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 SEL1LQ9UBV2 794 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 SH3BP1Q9Y3L3 701 aa17.24■□□□□ 0.35
CHMP4A-203ENST00000527154 MUC22E2RYF6 1773 aaPredicted RBP17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 MEI4A8MW99 385 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 WASH3PC4AMC7 463 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 NPC1O15118 1278 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 TLX3O43711 291 aaPredicted RBP17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 RTN3O95197 1032 aaPredicted RBP17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 ABL1P00519 1130 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 KRT19P08727 400 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 PDGFRBP09619 1106 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 TYRP14679 529 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 ACO1P21399 889 aaKnown RBP17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 MYO1EQ12965 1108 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 MDH1BQ5I0G3 518 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 SFR1Q86XK3 245 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 LARP4BQ92615 738 aaKnown RBP17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 P2RY11Q96G91 374 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 CALML4Q96GE6 196 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 XPO6Q96QU8 1125 aaKnown RBP17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 ZNF518BQ9C0D4 1074 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 CCSER2Q9H7U1 834 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 COL6A6A6NMZ7 2263 aa17.23■□□□□ 0.35
CHMP4A-203ENST00000527154 SPTA1P02549 2419 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 TEX51A0A1B0GUA7 166 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 HLA-EP13747 358 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 OXTRP30559 389 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 GRK6P43250 576 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 TPMTP51580 245 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 SUZ12Q15022 739 aaKnown RBP17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 LARP1BQ659C4 914 aaKnown RBP17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 KIAA1324Q6UXG2 1013 aaKnown RBP17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 FAM184AQ8NB25 1140 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 RBBP8NLQ8NC74 664 aaPredicted RBP17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 OR5B17Q8NGF7 314 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 SNIP1Q8TAD8 396 aaKnown RBP17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 FBXO32Q969P5 355 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 NXPE2Q96DL1 559 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 MRPL45Q9BRJ2 306 aaKnown RBP17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 CBWD1Q9BRT8 395 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 ZHX3Q9H4I2 956 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 COMMD8Q9NX08 183 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 WDR35Q9P2L0 1181 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 SLC27A6Q9Y2P4 619 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 PCDHGA1Q9Y5H4 931 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 SLCO1B1Q9Y6L6 691 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 STON1Q9Y6Q2 735 aa17.22■□□□□ 0.35
CHMP4A-203ENST00000527154 COL5A1P20908 1838 aaPredicted RBP17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 A0A1B0GVT2 93 aa17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 TMEM191BP0C7N4 346 aa17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 PTPN1P18031 435 aaKnown RBP17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 DDIT3P35638 169 aa17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 DHX8Q14562 1220 aaKnown RBP17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 RTP5Q14D33 572 aa17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 KIF19Q2TAC6 998 aa17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 SCFD1Q8WVM8 642 aa17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 IGSF8Q969P0 613 aa17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 DCBLD2Q96PD2 775 aa17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 KLF16Q9BXK1 252 aaPredicted RBP17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 B3GNT5Q9BYG0 378 aa17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 OLFML3Q9NRN5 406 aa17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 THAP10Q9P2Z0 257 aaPredicted RBP17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 CHORDC1Q9UHD1 332 aaPredicted RBP17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 EIF2B4Q9UI10 523 aaKnown RBP17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 EXOC7Q9UPT5 735 aa17.21■□□□□ 0.35
CHMP4A-203ENST00000527154 CKAP5Q14008 2032 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms