RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 OR6B3Q8NGW1 331 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 SLC44A1Q8WWI5 657 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 ZNF670Q9BS34 389 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 TINF2Q9BSI4 451 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 GCOM2Q9BZD3 368 aaPredicted RBP18.28■□□□□ 0.52
USH1C-205ENST00000527020 PLAC1Q9HBJ0 212 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 SLC17A7Q9P2U7 560 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 HESX1Q9UBX0 185 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 TRIM33Q9UPN9 1127 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 RECQL4O94761 1208 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 MAGEA6P43360 314 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 YARSP54577 528 aaKnown RBP18.28■□□□□ 0.52
USH1C-205ENST00000527020 HIC1Q14526 733 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 FAXCQ5TGI0 409 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 SH2D5Q6ZV89 423 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 OTOAQ7RTW8 1153 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 PRPF39Q86UA1 669 aaKnown RBP18.28■□□□□ 0.52
USH1C-205ENST00000527020 NPLOC4Q8TAT6 608 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 MAGEC3Q8TD91 643 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 C10orf82Q8WW14 230 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 CENPIQ92674 756 aaPredicted RBP18.28■□□□□ 0.52
USH1C-205ENST00000527020 SERAC1Q96JX3 654 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 ABHD16BQ9H3Z7 469 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 ARHGEF3Q9NR81 526 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 CHKBQ9Y259 395 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 DOCK3Q8IZD9 2030 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 CFAP69A5D8W1 941 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 RRN3P2A6NIE6 340 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 CCDC130P13994 396 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 ATP2A2P16615 1042 aaKnown RBP18.27■□□□□ 0.52
USH1C-205ENST00000527020 L1CAMP32004 1257 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 PTPN9P43378 593 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 NOTUMQ6P988 496 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 CAND1Q86VP6 1230 aaKnown RBP18.27■□□□□ 0.52
USH1C-205ENST00000527020 KIF2BQ8N4N8 673 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 MYLK2Q9H1R3 596 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 NRDE2Q9H7Z3 1164 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 SPON1Q9HCB6 807 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 PNPLA8Q9NP80 782 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 TTLL3Q9Y4R7 772 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 SCN4AP35499 1836 aa18.27■□□□□ 0.52
USH1C-205ENST00000527020 A8MXQ7 604 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 ZNF487B1APH4 448 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 PIRO00625 290 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 SPTLC1O15269 473 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 ZBED1O96006 694 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 SMIM10L2AP0DMW4 78 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 SMIM10L2BP0DMW5 78 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 AKAP5P24588 427 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 CYP2F1P24903 491 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 LMO2P25791 158 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 RPL34P49207 117 aaKnown RBP18.27■□□□□ 0.51
USH1C-205ENST00000527020 GTF2A1P52655 376 aaPredicted RBP18.27■□□□□ 0.51
USH1C-205ENST00000527020 YWHAGP61981 247 aaKnown RBP eCLIP18.27■□□□□ 0.51
USH1C-205ENST00000527020 ZNF200P98182 395 aaPredicted RBP18.27■□□□□ 0.51
USH1C-205ENST00000527020 FAAP100Q0VG06 881 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 SLC10A2Q12908 348 aaPredicted RBP18.27■□□□□ 0.51
USH1C-205ENST00000527020 PTK7Q13308 1070 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 DPYSL2Q16555 572 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 PPP6R3Q5H9R7 873 aaPredicted RBP18.27■□□□□ 0.51
USH1C-205ENST00000527020 IQSEC1Q6DN90 963 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 PNMA8AQ86V59 439 aaPredicted RBP18.27■□□□□ 0.51
USH1C-205ENST00000527020 ZDHHC17Q8IUH5 632 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 ALKBH8Q96BT7 664 aaKnown RBP18.27■□□□□ 0.51
USH1C-205ENST00000527020 KLHL29Q96CT2 875 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 POPDC2Q9HBU9 364 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 NOD2Q9HC29 1040 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 ETNK2Q9NVF9 386 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 MTMR10Q9NXD2 777 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 USH1CQ9Y6N9 552 aa18.27■□□□□ 0.51
USH1C-205ENST00000527020 TM9SF1O15321 606 aa18.26■□□□□ 0.51
USH1C-205ENST00000527020 KRT16P08779 473 aa18.26■□□□□ 0.51
USH1C-205ENST00000527020 PDGFRBP09619 1106 aa18.26■□□□□ 0.51
USH1C-205ENST00000527020 DARSP14868 501 aaKnown RBP18.26■□□□□ 0.51
USH1C-205ENST00000527020 RIPK1Q13546 671 aa18.26■□□□□ 0.51
USH1C-205ENST00000527020 ZNF618Q5T7W0 954 aa18.26■□□□□ 0.51
USH1C-205ENST00000527020 SLC26A9Q7LBE3 791 aa18.26■□□□□ 0.51
USH1C-205ENST00000527020 C7orf31Q8N865 590 aa18.26■□□□□ 0.51
USH1C-205ENST00000527020 CCDC110Q8TBZ0 833 aa18.26■□□□□ 0.51
USH1C-205ENST00000527020 ZNF408Q9H9D4 720 aa18.26■□□□□ 0.51
USH1C-205ENST00000527020 ETNK1Q9HBU6 452 aa18.26■□□□□ 0.51
USH1C-205ENST00000527020 WDR91A4D1P6 747 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 MBLAC1A4D2B0 266 aaPredicted RBP18.25■□□□□ 0.51
USH1C-205ENST00000527020 SPAG6O75602 509 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 UNC5CO95185 931 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 ADORA2BP29275 332 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 GBP2P32456 591 aaPredicted RBP18.25■□□□□ 0.51
USH1C-205ENST00000527020 SKIV2L2P42285 1042 aaKnown RBP18.25■□□□□ 0.51
USH1C-205ENST00000527020 NEK3P51956 506 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 GTF2A2P52657 109 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 GBE1Q04446 702 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 APBB1IPQ7Z5R6 666 aaPredicted RBP18.25■□□□□ 0.51
USH1C-205ENST00000527020 ANKRD23Q86SG2 305 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 CRYBG2Q8N1P7 616 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 ANKRD52Q8NB46 1076 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 TMEM40Q8WWA1 233 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 CFAP36Q96G28 342 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 APOL6Q9BWW8 343 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 F2P00734 622 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 MT-ND3P03897 115 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms