RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 NFE2Q16621 373 aaPredicted RBP13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 PKDCCQ504Y2 493 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 ZNF569Q5MCW4 686 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 DNTTIP2Q5QJE6 756 aaKnown RBP13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 NYAP1Q6ZVC0 841 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 MTSS1LQ765P7 747 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 ALYREFQ86V81 257 aaKnown RBP13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 LRRTM3Q86VH5 581 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 TTC30AQ86WT1 665 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 SPATA2LQ8IUW3 424 aaPredicted RBP13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 FUKQ8N0W3 1084 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 ATAD1Q8NBU5 361 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 SLC35G2Q8TBE7 412 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 MYLPFQ96A32 169 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 C18orf8Q96DM3 657 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 ARHGEF26Q96DR7 871 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 ZNF512Q96ME7 567 aaPredicted RBP13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 ALS2CR12Q96Q35 445 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 PLA2G2FQ9BZM2 168 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 ZCWPW1Q9H0M4 648 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 MRPL47Q9HD33 250 aaKnown RBP13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 CYLDQ9NQC7 956 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 WDR35Q9P2L0 1181 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 UVRAGQ9P2Y5 699 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 CA14Q9ULX7 337 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 SLC27A5Q9Y2P5 690 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 YIPF1Q9Y548 306 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 SCINQ9Y6U3 715 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 PTPRDP23468 1912 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 CLDN5O00501 218 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 ZNF197O14709 1029 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 XPO1O14980 1071 aaKnown RBP13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 BUB1O43683 1085 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 ECI2O75521 394 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 AP1G2O75843 785 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 MOCS3O95396 460 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 FCARP24071 287 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 ACADSBP45954 432 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 GABRB2P47870 512 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 SMARCB1Q12824 385 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 PTP4A2Q12974 167 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 ZNF268Q14587 947 aaPredicted RBP13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 PTPN20Q4JDL3 420 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 SLC39A12Q504Y0 691 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 CYP4A22Q5TCH4 519 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 TANGO2Q6ICL3 276 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 PAQR9Q6ZVX9 377 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 FAM35AQ86V20 835 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 TTC9BQ8N6N2 239 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 TRIM58Q8NG06 486 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 SLC35F5Q8WV83 523 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 SMARCD1Q96GM5 515 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 HSFY1Q96LI6 401 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 ZSWIM3Q96MP5 696 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 PKMYT1Q99640 499 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 KXD1Q9BQD3 176 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 KRT82Q9NSB4 513 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 PARVAQ9NVD7 372 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 HSFX1Q9UBD0 423 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 CYTH4Q9UIA0 394 aa13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 ZFHX2Q9C0A1 2572 aaPredicted RBP13.32□□□□□ -0.28
SSSCA1-203ENST00000526877 F5P12259 2224 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 CACNA1IQ9P0X4 2223 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 H0Y858 1186 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 GJA1P17302 382 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 RRM1P23921 792 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 CASQ1P31415 396 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 PLA2G4AP47712 749 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 RGS7P49802 495 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 HADHBP55084 474 aaKnown RBP13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 STARD6P59095 220 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 CCDC142Q17RM4 750 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 C2CD6Q53TS8 623 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 FAM78AQ5JUQ0 283 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 PMF1Q6P1K2 205 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 DNAJC24Q6P3W2 148 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 PDZD4Q76G19 769 aaPredicted RBP13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 TMC8Q8IU68 726 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 SYCE1Q8N0S2 351 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 LEMD2Q8NC56 503 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 ZNF564Q8TBZ8 553 aaPredicted RBP13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 ELSPBP1Q96BH3 223 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 FUBP3Q96I24 572 aaKnown RBP eCLIP13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 CPXM1Q96SM3 734 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 NUP85Q9BW27 656 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 SLC4A5Q9BY07 1137 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 IRX2Q9BZI1 471 aaPredicted RBP13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 UBXN6Q9BZV1 441 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 TBC1D17Q9HA65 648 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 ARHGEF3Q9NR81 526 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 TMLHEQ9NVH6 421 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 DLGAP2Q9P1A6 1054 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 SALL4Q9UJQ4 1053 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 PCDHB5Q9Y5E4 795 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 COL4A3Q01955 1670 aa13.31□□□□□ -0.28
SSSCA1-203ENST00000526877 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 SOAT2O75908 522 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 MTA2O94776 668 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 MYL4P12829 197 aa13.3□□□□□ -0.28
SSSCA1-203ENST00000526877 BDNFP23560 247 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms