RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 PRMT6Q96LA8 375 aaPredicted RBP12.75□□□□□ -0.37
FGFR1-227ENST00000526570 COASYQ13057 564 aa12.75□□□□□ -0.37
FGFR1-227ENST00000526570 CNPY1Q3B7I2 92 aa12.75□□□□□ -0.37
FGFR1-227ENST00000526570 ZNF568Q3ZCX4 644 aa12.75□□□□□ -0.37
FGFR1-227ENST00000526570 TDRKHQ9Y2W6 561 aaKnown RBP12.75□□□□□ -0.37
FGFR1-227ENST00000526570 PDS5AQ29RF7 1337 aaKnown RBP12.75□□□□□ -0.37
FGFR1-227ENST00000526570 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
FGFR1-227ENST00000526570 USP12O75317 370 aa12.75□□□□□ -0.37
FGFR1-227ENST00000526570 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
FGFR1-227ENST00000526570 TKTP29401 623 aaKnown RBP12.75□□□□□ -0.37
FGFR1-227ENST00000526570 ANKS1AQ92625 1134 aa12.75□□□□□ -0.37
FGFR1-227ENST00000526570 RNF38Q9H0F5 515 aa12.75□□□□□ -0.37
FGFR1-227ENST00000526570 ATP8B3O60423 1300 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 CASP4P49662 377 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 KCNH2Q12809 1159 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 TRADDQ15628 312 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 EPC2Q52LR7 807 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 ANKRD40Q6AI12 368 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 CCDC28AQ8IWP9 274 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 BBS7Q8IWZ6 715 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 KLF6Q99612 283 aaPredicted RBP12.74□□□□□ -0.37
FGFR1-227ENST00000526570 TBC1D10AQ9BXI6 508 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 KIAA1683Q9H0B3 1180 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 FAM53CQ9NYF3 392 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 TEX28O15482 410 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 KLRC1P26715 233 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 GNL1P36915 607 aaPredicted RBP12.74□□□□□ -0.37
FGFR1-227ENST00000526570 ZSWIM7Q19AV6 140 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 POLNQ7Z5Q5 900 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 ARID3BQ8IVW6 561 aaPredicted RBP12.74□□□□□ -0.37
FGFR1-227ENST00000526570 TTC13Q8NBP0 860 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 KCTD6Q8NC69 237 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 KAZALD1Q96I82 304 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 CALN1Q9BXU9 219 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 SAR1AQ9NR31 198 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 SYNPO2Q9UMS6 1093 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 DNM1LO00429 736 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 ZNF263O14978 683 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 CLOCKO15516 846 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 DGKIO75912 1065 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 TNFRSF8P28908 595 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 TYK2P29597 1187 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 GSSP48637 474 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 TBX2Q13207 712 aaPredicted RBP12.74□□□□□ -0.37
FGFR1-227ENST00000526570 TXNDC11Q6PKC3 985 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 SLC35G2Q8TBE7 412 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 EML4Q9HC35 981 aaKnown RBP12.74□□□□□ -0.37
FGFR1-227ENST00000526570 JPH1Q9HDC5 661 aaPredicted RBP12.74□□□□□ -0.37
FGFR1-227ENST00000526570 STON1Q9Y6Q2 735 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 ASMTLO95671 621 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 CETPP11597 493 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 CCNA2P20248 432 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 ANXA13P27216 316 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 ITGA8P53708 1063 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 COPZ1P61923 177 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 TKFCQ3LXA3 575 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 PACS1Q6VY07 963 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 TMC3Q7Z5M5 1100 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 TXNRD3Q86VQ6 643 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 ANKRD13AQ8IZ07 590 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 RDM1Q8NG50 284 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 OR6B3Q8NGW1 331 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 OR6Y1Q8NGX8 325 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 ZFAND2BQ8WV99 257 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 E2F7Q96AV8 911 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 SERHL2Q9H4I8 314 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 SERHLQ9NQF3 203 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 EHD3Q9NZN3 535 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 CNOT8Q9UFF9 292 aaKnown RBP12.74□□□□□ -0.37
FGFR1-227ENST00000526570 FADS3Q9Y5Q0 445 aa12.74□□□□□ -0.37
FGFR1-227ENST00000526570 TRMUO75648 421 aaKnown RBP12.73□□□□□ -0.37
FGFR1-227ENST00000526570 B3GALNT1O75752 331 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 PLEKP08567 350 aaPredicted RBP12.73□□□□□ -0.37
FGFR1-227ENST00000526570 MAGEA2P43356 314 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 MAGEA4P43358 317 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 OR6B2Q6IFH4 312 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 GPATCH1Q9BRR8 931 aaKnown RBP12.73□□□□□ -0.37
FGFR1-227ENST00000526570 LRRC4Q9HBW1 653 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 SENP2Q9HC62 589 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 PCDHGA10Q9Y5H3 936 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 PCDHA10Q9Y5I2 948 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 COL3A1P02461 1466 aaPredicted RBP12.73□□□□□ -0.37
FGFR1-227ENST00000526570 UBE2Q2LH0YL09 131 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 BIRC5O15392 142 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 THRAP10827 490 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 ARSEP51690 589 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 ANTXR2P58335 489 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 IFI35P80217 286 aaPredicted RBP12.73□□□□□ -0.37
FGFR1-227ENST00000526570 DENND5AQ6IQ26 1287 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 OR7A2PQ8NGA2 310 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 EMILIN2Q9BXX0 1053 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 LACRTQ9GZZ8 138 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 KCNH4Q9UQ05 1017 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 CYP2B6P20813 491 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 STARP49675 285 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 RBM20Q5T481 1227 aaKnown RBP12.73□□□□□ -0.37
FGFR1-227ENST00000526570 RNF43Q68DV7 783 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 GLYCTKQ8IVS8 523 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 OR8H1Q8NGG4 311 aa12.73□□□□□ -0.37
FGFR1-227ENST00000526570 USP13Q92995 863 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms