RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 TPH2Q8IWU9 490 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 FAM178BQ8IXR5 827 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 DDHD1Q8NEL9 900 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 MKL1Q969V6 931 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 CCDC127Q96BQ5 260 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 FAM84AQ96KN4 292 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 KREMEN1Q96MU8 473 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 SSU72Q9NP77 194 aaKnown RBP11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 KIAA1522Q9P206 1035 aaPredicted RBP11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 VPS51Q9UID3 782 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 LTBP1Q14766 1721 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 SF3B1O75533 1304 aaKnown RBP eCLIP11.67□□□□□ -0.543e-6■■■■■ 82.3
CLNS1A-204ENST00000525428 DDTLA6NHG4 134 aaPredicted RBP11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 LIASO43766 372 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 TCF4P15884 667 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 C21orf59P57076 290 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 APOFQ13790 326 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 BMPR2Q13873 1038 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 ODR4Q5SWX8 454 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 KBTBD6Q86V97 674 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 JADE3Q92613 823 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 ATP2A3Q93084 1043 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 AGAP3Q96P47 875 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 WDR83Q9BRX9 315 aaKnown RBP11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 EIF2AQ9BY44 585 aaKnown RBP11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 C1orf21Q9H246 121 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 ACSS3Q9H6R3 686 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 ZNF287Q9HBT7 754 aa11.67□□□□□ -0.54
CLNS1A-204ENST00000525428 TCRBV7S3A2A0A539 114 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 GOLGA8IPA6NC78 632 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 GOLGA8JA6NMD2 632 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 TRIM49D1C9J1S8 452 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 CDK8P49336 464 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 NDST2P52849 883 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 MAPK10P53779 464 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 NRLP54845 237 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 MORF4L2Q15014 288 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 CYP2A13Q16696 494 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 BMT2Q1RMZ1 405 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 KLHL38Q2WGJ6 581 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 VWA5B1Q5TIE3 1220 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 FAM91A1Q658Y4 838 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 RINT1Q6NUQ1 792 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 ERMNQ8TAM6 284 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 ACTRT2Q8TDY3 377 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 NUF2Q9BZD4 464 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 FOXP3Q9BZS1 431 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 ATRNL1Q5VV63 1379 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 ATAD5Q96QE3 1844 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 ASTN2O75129 1339 aaPredicted RBP11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 IQANK1A0A1B0GTG1 560 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 LRRC37AA6NMS7 1700 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 PIK3R2O00459 728 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 NOP56O00567 594 aaKnown RBP11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 CASQ2O14958 399 aaPredicted RBP11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 PSMC3P17980 439 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 NUP107P57740 925 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 PSMC1P62191 440 aaKnown RBP11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 TCEAL1Q15170 157 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 ADRM1Q16186 407 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 EGFLAMQ63HQ2 1017 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 NANOGP8Q6NSW7 305 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 FRMD7Q6ZUT3 714 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 ADGRF4Q8IZF3 695 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 SCAIQ8N9R8 606 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 PLEKHA8Q96JA3 519 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 ZMAT2Q96NC0 199 aaKnown RBP11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 SEMA6AQ9H2E6 1030 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 TPK1Q9H3S4 243 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 RIOX1Q9H6W3 641 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 SACM1LQ9NTJ5 587 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 ZNRF3Q9ULT6 936 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 CDC14AQ9UNH5 594 aa11.66□□□□□ -0.54
CLNS1A-204ENST00000525428 A8MU76 341 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 CFLARO15519 480 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 ZC3H11AO75152 810 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 TCN1P20061 433 aaPredicted RBP11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 ITGAXP20702 1163 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 NFX1Q12986 1120 aaKnown RBP11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 ATG16L1Q676U5 607 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 ACAD10Q6JQN1 1059 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 RSBN1LQ6PCB5 846 aaPredicted RBP11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 IGDCC3Q8IVU1 814 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 FAM71AQ8IYT1 594 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 FBXW8Q8N3Y1 598 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 PPM1NQ8N819 430 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 HELQQ8TDG4 1101 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 NAP1L4Q99733 375 aaKnown RBP11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 CNTN3Q9P232 1028 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 HESX1Q9UBX0 185 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 ITGB1BP2Q9UKP3 347 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 RAB26Q9ULW5 256 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 POLIQ9UNA4 740 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 PCNTO95613 3336 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 ADAMTSL1Q8N6G6 1762 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 USP17L10C9JJH3 530 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 PSMD12O00232 456 aaPredicted RBP11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 CD1EP15812 388 aa11.65□□□□□ -0.54
CLNS1A-204ENST00000525428 FGFR3P22607 806 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms