RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 WDTC1Q8N5D0 677 aa13.6□□□□□ -0.23
CTSB-209ENST00000525315 PJA1Q8NG27 643 aa13.6□□□□□ -0.23
CTSB-209ENST00000525315 FAM3CQ92520 227 aa13.6□□□□□ -0.23
CTSB-209ENST00000525315 NDRG1Q92597 394 aaKnown RBP13.6□□□□□ -0.23
CTSB-209ENST00000525315 CLDN23Q96B33 292 aa13.6□□□□□ -0.23
CTSB-209ENST00000525315 CDK5RAP1Q96SZ6 601 aaKnown RBP13.6□□□□□ -0.23
CTSB-209ENST00000525315 SLC4A5Q9BY07 1137 aa13.6□□□□□ -0.23
CTSB-209ENST00000525315 FOXQ1Q9C009 403 aa13.6□□□□□ -0.23
CTSB-209ENST00000525315 LHX5Q9H2C1 402 aa13.6□□□□□ -0.23
CTSB-209ENST00000525315 EBF3Q9H4W6 596 aa13.6□□□□□ -0.23
CTSB-209ENST00000525315 LTB4R2Q9NPC1 389 aa13.6□□□□□ -0.23
CTSB-209ENST00000525315 SMPD4Q9NXE4 827 aa13.6□□□□□ -0.23
CTSB-209ENST00000525315 DNMT3LQ9UJW3 386 aa13.6□□□□□ -0.23
CTSB-209ENST00000525315 MRPS17Q9Y2R5 130 aaKnown RBP13.6□□□□□ -0.23
CTSB-209ENST00000525315 ATG2BQ96BY7 2078 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 SPECC1L-ADORA2AF8WAN1 911 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 SLC9A3R1O14745 358 aaPredicted RBP13.59□□□□□ -0.23
CTSB-209ENST00000525315 GREM1O60565 184 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 PNMA6AP0CW24 399 aaPredicted RBP13.59□□□□□ -0.23
CTSB-209ENST00000525315 LCP1P13796 627 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 ARSAP15289 507 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 TARSP26639 723 aaKnown RBP13.59□□□□□ -0.23
CTSB-209ENST00000525315 CTHP32929 405 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 SOX9P48436 509 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 IFNAR2P48551 515 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 RGS7P49802 495 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 DAOAP59103 153 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 UBXN1Q04323 297 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 ADIGQ0VDE8 80 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 RAPGEF1Q13905 1077 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 SYCP1Q15431 976 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 HTR3DQ70Z44 454 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 TMEM110Q86TL2 294 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 SLC47A2Q86VL8 602 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 CCDC105Q8IYK2 499 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 TTC8Q8TAM2 541 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 IRGQQ8WZA9 623 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 ATP2A3Q93084 1043 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 PRRX2Q99811 253 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 ECT2Q9H8V3 914 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 CBX8Q9HC52 389 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
CTSB-209ENST00000525315 CFAP97Q9P2B7 532 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 TBC1D14Q9P2M4 693 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 CYTH4Q9UIA0 394 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 NUDT5Q9UKK9 219 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 WNT6Q9Y6F9 365 aa13.59□□□□□ -0.23
CTSB-209ENST00000525315 YJEFN3A6XGL0 299 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 E7ENQ6 273 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 EPHB6O15197 1021 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 NCAM2O15394 837 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 FBXO21O94952 628 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 DCNP07585 359 aaKnown RBP13.58□□□□□ -0.24
CTSB-209ENST00000525315 ACADSBP45954 432 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 JAM2P57087 298 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 UBXN2BQ14CS0 331 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 NFKBIBQ15653 356 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 C10orf120Q5SQS8 335 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 BSPRYQ5W0U4 402 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 BTBD8Q5XKL5 378 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 TXNDC11Q6PKC3 985 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 SIX6OS1Q8N1H7 587 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 TTC16Q8NEE8 873 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 WBP2Q969T9 261 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 OTUB2Q96DC9 234 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 CHFRQ96EP1 664 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 NACA2Q9H009 215 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 ABCC13Q9NSE7 274 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 HCN4Q9Y3Q4 1203 aa13.58□□□□□ -0.24
CTSB-209ENST00000525315 F8VZ95 297 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 PIK3R2O00459 728 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 TRDMT1O14717 391 aaKnown RBP13.57□□□□□ -0.24
CTSB-209ENST00000525315 MDM4O15151 490 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 TEX33O43247 280 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 GALR2O43603 387 aaPredicted RBP13.57□□□□□ -0.24
CTSB-209ENST00000525315 NFATC1O95644 943 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 CHRNB1P11230 501 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 CYP11B1P15538 503 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 GJA4P35212 333 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 KRT9P35527 623 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 MAGEA9P43362 315 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 RPS9P46781 194 aaKnown RBP13.57□□□□□ -0.24
CTSB-209ENST00000525315 POLR2FP61218 127 aaKnown RBP13.57□□□□□ -0.24
CTSB-209ENST00000525315 COG7P83436 770 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 AMPD2Q01433 879 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 NR1H3Q13133 447 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 SCUBE3Q8IX30 993 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 DTWD2Q8NBA8 298 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 NEK11Q8NG66 645 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 CLEC4CQ8WTT0 213 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 DDX1Q92499 740 aaKnown RBP13.57□□□□□ -0.24
CTSB-209ENST00000525315 NAP1L5Q96NT1 182 aaPredicted RBP13.57□□□□□ -0.24
CTSB-209ENST00000525315 FAM207AQ9NSI2 230 aaPredicted RBP13.57□□□□□ -0.24
CTSB-209ENST00000525315 OLA1Q9NTK5 396 aaKnown RBP13.57□□□□□ -0.24
CTSB-209ENST00000525315 RAPGEFL1Q9UHV5 662 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 SH3BP1Q9Y3L3 701 aa13.57□□□□□ -0.24
CTSB-209ENST00000525315 A0A1B0GTH6 734 aa13.56□□□□□ -0.24
CTSB-209ENST00000525315 STC2O76061 302 aa13.56□□□□□ -0.24
CTSB-209ENST00000525315 LTFP02788 710 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms