RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 OR6C4Q8NGE1 309 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 SETD6Q8TBK2 473 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 DCAF11Q8TEB1 546 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 SLC5A11Q8WWX8 675 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 C3orf49Q96BT1 292 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 PTCHD1Q96NR3 888 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 GCNAQ96QF7 691 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 PRAM1Q96QH2 718 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 TCF25Q9BQ70 676 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 ZNF518BQ9C0D4 1074 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 INTS2Q9H0H0 1204 aaKnown RBP4.75□□□□□ -1.65
CD44-213ENST00000525209 IL21RQ9HBE5 538 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 TCP11L1Q9NUJ3 509 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 CLDND1Q9NY35 253 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 CLIP2Q9UDT6 1046 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 FAM153AQ9UHL3 310 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 ZMYND8Q9ULU4 1186 aaPredicted RBP4.75□□□□□ -1.65
CD44-213ENST00000525209 CA14Q9ULX7 337 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 MRPL11Q9Y3B7 192 aaKnown RBP4.75□□□□□ -1.65
CD44-213ENST00000525209 PAXBP1Q9Y5B6 917 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 TIMM13Q9Y5L4 95 aaPredicted RBP4.75□□□□□ -1.65
CD44-213ENST00000525209 POMT1Q9Y6A1 747 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 SNAPC4Q5SXM2 1469 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 SOGA1O94964 1423 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 NPHP3-ACAD11A0A0J9YXS1 232 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 A0A1W2PRV1 198 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 GLOD5A6NK44 160 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 LIPT2A6NK58 231 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 ADARB2-AS1A8MUL3 147 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 TMEM232C9JQI7 657 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 PYCARD-AS1I3L0S3 204 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 KIF2AO00139 706 aaPredicted RBP4.74□□□□□ -1.65
CD44-213ENST00000525209 MEIS1O00470 390 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 TSPAN4O14817 238 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 PCDH17O14917 1159 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 TGFB1I1O43294 461 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 SLC25A17O43808 307 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 TLR2O60603 784 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 MTRF1O75570 445 aaKnown RBP4.74□□□□□ -1.65
CD44-213ENST00000525209 LRIG2O94898 1065 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 REC8O95072 547 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 PRAMEF1O95521 474 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 C22orf31O95567 290 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 NTSR2O95665 410 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 PAHP00439 452 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 HMOX1P09601 288 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 FTH1P19P0C7X4 201 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 ALADP13716 330 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 KRT4P19013 534 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 MALP21145 153 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 SAT1P21673 171 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 CPT2P23786 658 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 MCM7P33993 719 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 SOX6P35712 828 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 TXKP42681 527 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 ZNF81P51508 661 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 ACTR1AP61163 376 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 ZNF200P98182 395 aaPredicted RBP4.74□□□□□ -1.65
CD44-213ENST00000525209 DEUP1Q05D60 604 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 RUNX1T1Q06455 604 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 SLC20A2Q08357 652 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 CETN1Q12798 172 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 CUL2Q13617 745 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 COL9A3Q14050 684 aaPredicted RBP4.74□□□□□ -1.65
CD44-213ENST00000525209 DOC2BQ14184 412 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 MXD4Q14582 209 aaPredicted RBP4.74□□□□□ -1.65
CD44-213ENST00000525209 NFIXQ14938 502 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 NTRK2Q16620 822 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 ZRANB3Q5FWF4 1079 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 C12orf60Q5U649 245 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 TAF3Q5VWG9 929 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 RAP1GAP2Q684P5 730 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 OTUD7BQ6GQQ9 843 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 FAM111BQ6SJ93 734 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 CRTC3Q6UUV7 619 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 DNAAF5Q86Y56 855 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 LINC00346Q8IVM7 164 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 NLGN4XQ8N0W4 816 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 DCBLD1Q8N8Z6 715 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 SYT2Q8N9I0 419 aaPredicted RBP4.74□□□□□ -1.65
CD44-213ENST00000525209 ANKRD53Q8N9V6 530 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 OR56B2PQ8NGI1 322 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 CPT1CQ8TCG5 803 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 HASPINQ8TF76 798 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 NOC3LQ8WTT2 800 aaKnown RBP4.74□□□□□ -1.65
CD44-213ENST00000525209 STAMQ92783 540 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 FAM81BQ96LP2 452 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 ZNF396Q96N95 335 aaPredicted RBP4.74□□□□□ -1.65
CD44-213ENST00000525209 FANCD2OSQ96PS1 177 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 NR1H4Q96RI1 486 aaPredicted RBP4.74□□□□□ -1.65
CD44-213ENST00000525209 FAM118BQ9BPY3 351 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 LPIN3Q9BQK8 851 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 LZTS2Q9BRK4 669 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 TACO1Q9BSH4 297 aaKnown RBP4.74□□□□□ -1.65
CD44-213ENST00000525209 SLC7A5P2Q9GIP4 190 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 NYXQ9GZU5 481 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 PCDHAC1Q9H158 963 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 ISCUQ9H1K1 167 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 VPS16Q9H269 839 aa4.74□□□□□ -1.65
CD44-213ENST00000525209 CLSTN2Q9H4D0 955 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms