RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PTP4A2Q12974 167 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 TBX2Q13207 712 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 NME3Q13232 169 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 MTF1Q14872 753 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 STILQ15468 1287 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 DCAF6Q58WW2 860 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM102AQ5T9C2 384 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 SH3PXD2AQ5TCZ1 1133 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 PM20D1Q6GTS8 502 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 TRNP1Q6NT89 227 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 WDR59Q6PJI9 974 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 OLFML1Q6UWY5 402 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 CCDC186Q7Z3E2 898 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 TMEM110Q86TL2 294 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 XYLT1Q86Y38 959 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 FMNL3Q8IVF7 1028 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 YAF2Q8IY57 180 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 DEFB106AQ8N104 65 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 PLCD3Q8N3E9 789 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 TC2NQ8N9U0 490 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 LEMD2Q8NC56 503 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 PDZD8Q8NEN9 1154 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ZNF397Q8NF99 534 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 BPIFB1Q8TDL5 484 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 IPO4Q8TEX9 1081 aaKnown RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 RNF139Q8WU17 664 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ZFRQ96KR1 1074 aaKnown RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 HSFY1Q96LI6 401 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 CFAP57Q96MR6 1250 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 SYT11Q9BT88 431 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 NUP58Q9BVL2 599 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 PACSIN1Q9BY11 444 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ADAM33Q9BZ11 813 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 MAGEB5Q9BZ81 275 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 TRIM7Q9C029 511 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 LHX5Q9H2C1 402 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 EBF3Q9H4W6 596 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM124BQ9H5Z6 455 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 BRD9Q9H8M2 597 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ZFP14Q9HCL3 533 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 PNPLA8Q9NP80 782 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 AVENQ9NQS1 362 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 HEBP1Q9NRV9 189 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ABHD10Q9NUJ1 306 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 TDP1Q9NUW8 608 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 GTSE1Q9NYZ3 720 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 GDE1Q9NZC3 331 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 AIPL1Q9NZN9 384 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 CALCOCO1Q9P1Z2 691 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ARHGAP20Q9P2F6 1191 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 EPS15L1Q9UBC2 864 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 PRKAG3Q9UGI9 489 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ADAMTS1Q9UHI8 967 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 XPO7Q9UIA9 1087 aaKnown RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 CEP83Q9Y592 693 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.82□□□□□ -1.641e-6■■■■□ 21.6
CHMP4A-202ENST00000524955 SNX10Q9Y5X0 201 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 C5orf42Q9H799 3197 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 UNC80Q8N2C7 3258 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 GOLGA6L3A6NEY3 463 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 SOWAHDA6NJG2 315 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 STK25O00506 426 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 CAPN9O14815 690 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ZNF263O14978 683 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 TRIM24O15164 1050 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 STC2O76061 302 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 FGF19O95750 216 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 FTLP02792 175 aaPredicted RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 KLKB1P03952 638 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 SERPING1P05155 500 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 UNGP13051 313 aaPredicted RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 MMP8P22894 467 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 RRM1P23921 792 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 WEE1P30291 646 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 CORO1AP31146 461 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 CDH5P33151 784 aaPredicted RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ATP5C1P36542 298 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 FLT3P36888 993 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ACADSBP45954 432 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 NSFP46459 744 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 IFNAR2P48551 515 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 RPL34P49207 117 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 SULT1E1P49888 294 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 RPL7AP62424 266 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 YWHAZP63104 245 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ATP11AP98196 1134 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC6A3Q01959 620 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 USP4Q13107 963 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 TDGQ13569 410 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ZNF77Q15935 545 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 CDO1Q16878 200 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 C15orf59Q2T9L4 293 aaPredicted RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ZC3H12AQ5D1E8 599 aaKnown RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 FIGNQ5HY92 759 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 CCDC122Q5T0U0 273 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 DAB2IPQ5VWQ8 1189 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 ACAD10Q6JQN1 1059 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 CC2D1AQ6P1N0 951 aaPredicted RBP4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 RFWD3Q6PCD5 774 aa4.81□□□□□ -1.64
CHMP4A-202ENST00000524955 TPGS1Q6ZTW0 290 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms