RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SCAF8Q9UPN6 1271 aaKnown RBP2.18□□□□□ -2.06
CD44-212ENST00000524922 TBC1D30Q9Y2I9 924 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 MED16Q9Y2X0 877 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 MRFAP1Q9Y605 127 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 CCDC7Q96M83 1385 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 SBNO2Q9Y2G9 1366 aa2.18□□□□□ -2.06
CD44-212ENST00000524922 TNS2Q63HR2 1409 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 LRRC37A3O60309 1634 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 ARHGEF28Q8N1W1 1705 aaKnown RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 KCNU1A8MYU2 1149 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 hCG_1984214I3L0E3 225 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 UNC5CO95185 931 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 PDE8BO95263 885 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 BMP15O95972 392 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 FTLP02792 175 aaPredicted RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 HOXB6P17509 224 aaKnown RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 ARHGAP25P42331 645 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 RECQLP46063 649 aaPredicted RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 PXNP49023 591 aaPredicted RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 SOX8P57073 446 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 PSG6Q00889 435 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 MYO1EQ12965 1108 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 FHL1Q13642 323 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 FAM50AQ14320 339 aaKnown RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 IQCB1Q15051 598 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 LY6KQ17RY6 165 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 THEMIS2Q5TEJ8 643 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 ARHGAP40Q5TG30 622 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 RGS7BPQ6MZT1 257 aaPredicted RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 KRT28Q7Z3Y7 464 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 IRF2BP2Q7Z5L9 587 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 BCDIN3DQ7Z5W3 292 aaKnown RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 PNMA8AQ86V59 439 aaPredicted RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 LINC01465Q8N7H1 131 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 NRACQ8N912 160 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 TERB1Q8NA31 727 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 PNISRQ8TF01 805 aaKnown RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 CTHRC1Q96CG8 243 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 GCC1Q96CN9 775 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 CAMK1GQ96NX5 476 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 BRIP1Q9BX63 1249 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 ADGRE3Q9BY15 652 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 DPH1Q9BZG8 443 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 PNPOQ9NVS9 261 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 USP35Q9P2H5 1018 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 KLHL13Q9P2N7 655 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 FEZ2Q9UHY8 353 aaPredicted RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 ZNF580Q9UK33 172 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 MRPS17Q9Y2R5 130 aaKnown RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 SNX14Q9Y5W7 946 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 NSD2O96028 1365 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 COL5A2P05997 1499 aaPredicted RBP2.17□□□□□ -2.06
CD44-212ENST00000524922 SPATA31E1Q6ZUB1 1445 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 WDR17Q8IZU2 1322 aa2.17□□□□□ -2.06
CD44-212ENST00000524922 KAT6BQ8WYB5 2073 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 PIEZO1Q92508 2521 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 A0A087WWL8 130 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 ALG1L2C9J202 215 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 POC1B-GALNT4F8VUJ3 575 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 QSOX1O00391 747 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 IKBKBO14920 756 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 VNN1O95497 513 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 GNAI2P04899 355 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 CHRM5P08912 532 aaPredicted RBP2.16□□□□□ -2.06
CD44-212ENST00000524922 NPSP0C0P6 89 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 ATF7P17544 494 aaPredicted RBP2.16□□□□□ -2.06
CD44-212ENST00000524922 KCNA3P22001 575 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 HOXD9P28356 352 aaPredicted RBP2.16□□□□□ -2.06
CD44-212ENST00000524922 ADORA2AP29274 412 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 SLC11A2P49281 568 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 RENBPP51606 427 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 RAPGEF1Q13905 1077 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 RABEP1Q15276 862 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 SEC23BQ15437 767 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 TRIP6Q15654 476 aaKnown RBP2.16□□□□□ -2.06
CD44-212ENST00000524922 GPR162Q16538 588 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 TRIM71Q2Q1W2 868 aaKnown RBP2.16□□□□□ -2.06
CD44-212ENST00000524922 PGS1Q32NB8 556 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 ATAT1Q5SQI0 421 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 ZNF813Q6ZN06 617 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 GAS2L3Q86XJ1 694 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 MIER2Q8N344 545 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 GALNT4Q8N4A0 578 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 PIGOQ8TEQ8 1089 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 WIPF2Q8TF74 440 aaPredicted RBP2.16□□□□□ -2.06
CD44-212ENST00000524922 HPS3Q969F9 1004 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 MVB12AQ96EY5 273 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 SLC35A4Q96G79 324 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 PRR25Q96S07 402 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 GLOD4Q9HC38 313 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 PRDM11Q9NQV5 511 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 RRP7BPQ9NSQ0 103 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 XPR1Q9UBH6 696 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 PCDHA6Q9UN73 950 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 PLEKHM1Q9Y4G2 1056 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 SPEF1Q9Y4P9 236 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 WDR90Q96KV7 1748 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 SLIT3O75094 1523 aa2.16□□□□□ -2.06
CD44-212ENST00000524922 KDM6AO15550 1401 aaPredicted RBP2.16□□□□□ -2.06
CD44-212ENST00000524922 SMG6Q86US8 1419 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms