RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 ZNF587Q96SQ5 575 aaPredicted RBP7.9□□□□□ -1.14
CTR9-202ENST00000524523 HNRNPABQ99729 332 aaKnown RBP7.9□□□□□ -1.14
CTR9-202ENST00000524523 OSBPL8Q9BZF1 889 aa7.9□□□□□ -1.14
CTR9-202ENST00000524523 SMYD3Q9H7B4 428 aa7.9□□□□□ -1.14
CTR9-202ENST00000524523 SYNCQ9H7C4 482 aa7.9□□□□□ -1.14
CTR9-202ENST00000524523 FAM105AQ9NUU6 356 aa7.9□□□□□ -1.14
CTR9-202ENST00000524523 DNAJB12Q9NXW2 375 aaKnown RBP7.9□□□□□ -1.14
CTR9-202ENST00000524523 SAGE1Q9NXZ1 904 aa7.9□□□□□ -1.14
CTR9-202ENST00000524523 EHD2Q9NZN4 543 aa7.9□□□□□ -1.14
CTR9-202ENST00000524523 MTRF1LQ9UGC7 380 aaKnown RBP7.9□□□□□ -1.14
CTR9-202ENST00000524523 DDX20Q9UHI6 824 aaKnown RBP7.9□□□□□ -1.14
CTR9-202ENST00000524523 NFU1Q9UMS0 254 aa7.9□□□□□ -1.14
CTR9-202ENST00000524523 SLC6A14Q9UN76 642 aa7.9□□□□□ -1.14
CTR9-202ENST00000524523 GABRQQ9UN88 632 aa7.9□□□□□ -1.14
CTR9-202ENST00000524523 ST3GAL5Q9UNP4 418 aa7.9□□□□□ -1.14
CTR9-202ENST00000524523 SNX9Q9Y5X1 595 aa7.9□□□□□ -1.14
CTR9-202ENST00000524523 CDY2AQ9Y6F7 541 aa7.9□□□□□ -1.14
CTR9-202ENST00000524523 TMEM110-MUSTN1A8MSY1 372 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 TTI1O43156 1089 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 PPFIA2O75334 1257 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 ENDOD1O94919 500 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 CHRNA1P02708 482 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 ITGA4P13612 1032 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 CAPN2P17655 700 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 RDXP35241 583 aaKnown RBP7.89□□□□□ -1.15
CTR9-202ENST00000524523 RFC1P35251 1148 aaPredicted RBP7.89□□□□□ -1.15
CTR9-202ENST00000524523 PTPN9P43378 593 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 TNNT3P45378 269 aaPredicted RBP7.89□□□□□ -1.15
CTR9-202ENST00000524523 DNA2P51530 1060 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 RNASE9P60153 205 aaKnown RBP7.89□□□□□ -1.15
CTR9-202ENST00000524523 RPL7AP62424 266 aaKnown RBP7.89□□□□□ -1.15
CTR9-202ENST00000524523 BST2Q10589 180 aaKnown RBP7.89□□□□□ -1.15
CTR9-202ENST00000524523 DSC3Q14574 896 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 PDK2Q15119 407 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 PTGISQ16647 500 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 PTPN20Q4JDL3 420 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 EFHC1Q5JVL4 640 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 CXCL17Q6UXB2 119 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 SLC26A9Q7LBE3 791 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 PASD1Q8IV76 773 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 SCML4Q8N228 414 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 MICALL1Q8N3F8 863 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 IFT81Q8WYA0 676 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 KCTD13Q8WZ19 329 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 NKD2Q969F2 451 aaPredicted RBP7.89□□□□□ -1.15
CTR9-202ENST00000524523 MCEEQ96PE7 176 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 CPXM1Q96SM3 734 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 RUFY1Q96T51 708 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 FMO2Q99518 471 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 TMEM109Q9BVC6 243 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 TXLNGYQ9BZA5 131 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 DCLK3Q9C098 648 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 SNX25Q9H3E2 840 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 NXF3Q9H4D5 531 aaKnown RBP7.89□□□□□ -1.15
CTR9-202ENST00000524523 RSAD1Q9HA92 442 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 ERVK-5Q9HDB9 667 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 ZDHHC18Q9NUE0 388 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 SMARCAL1Q9NZC9 954 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 TSPAN16Q9UKR8 245 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 DSEQ9UL01 958 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 GINS2Q9Y248 185 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 STARD13Q9Y3M8 1113 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 KAT6AQ92794 2004 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 EVPLQ92817 2033 aa7.89□□□□□ -1.15
CTR9-202ENST00000524523 SCN10AQ9Y5Y9 1956 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 C2CD4BA6NLJ0 364 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 A8MXQ7 604 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 M0QYV0 167 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 XPO1O14980 1071 aaKnown RBP7.88□□□□□ -1.15
CTR9-202ENST00000524523 FBXO21O94952 628 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 PARNO95453 639 aaKnown RBP7.88□□□□□ -1.15
CTR9-202ENST00000524523 PGK1P00558 417 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 CYP11A1P05108 521 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 ITGAVP06756 1048 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 PFKMP08237 780 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 NUDT17P0C025 328 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 RARGP13631 454 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 FGFR4P22455 802 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 PSMA2P25787 234 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 PCSK1P29120 753 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 ECHS1P30084 290 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 STIP1P31948 543 aaKnown RBP7.88□□□□□ -1.15
CTR9-202ENST00000524523 CDKN2BP42772 138 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 MARCKSL1P49006 195 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 ZNF135P52742 658 aaPredicted RBP7.88□□□□□ -1.15
CTR9-202ENST00000524523 AIF1P55008 147 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 FAM189BP81408 668 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 CBX1P83916 185 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 ZNF200P98182 395 aaPredicted RBP7.88□□□□□ -1.15
CTR9-202ENST00000524523 SLC6A3Q01959 620 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 PLCB3Q01970 1234 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 TMEM62Q0P6H9 643 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 CALCOCO2Q13137 446 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 ZNF211Q13398 564 aaPredicted RBP7.88□□□□□ -1.15
CTR9-202ENST00000524523 ITGA7Q13683 1181 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 PTK6Q13882 451 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 TFDP2Q14188 446 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 HLTFQ14527 1009 aaKnown RBP eCLIP7.88□□□□□ -1.15
CTR9-202ENST00000524523 TERF2Q15554 542 aa7.88□□□□□ -1.15
CTR9-202ENST00000524523 FAM47CQ5HY64 1035 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms