RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 HEBP1Q9NRV9 189 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 GKN1Q9NS71 199 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 ABCC13Q9NSE7 274 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 OSER1Q9NX31 292 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 DUS2Q9NX74 493 aaKnown RBP13.18□□□□□ -0.3
VEGFA-225ENST00000523950 TBC1D14Q9P2M4 693 aa13.18□□□□□ -0.3
VEGFA-225ENST00000523950 MIA3Q5JRA6 1907 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 KANSL1LA0AUZ9 987 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 NFATC1O95644 943 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 CALCAP01258 141 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 PNMA6AP0CW24 399 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-225ENST00000523950 LCP1P13796 627 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 AOC1P19801 751 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 SOX5P35711 763 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 MAGEA9P43362 315 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 PGFP49763 221 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 RGS7P49802 495 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 KPNA1P52294 538 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-225ENST00000523950 ZXDBP98169 803 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 PDCLQ13371 301 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 RUNX3Q13761 415 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 CWF19L1Q69YN2 538 aaKnown RBP13.17□□□□□ -0.3
VEGFA-225ENST00000523950 ASTLQ6HA08 431 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-225ENST00000523950 BEND5Q7L4P6 421 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 BHLHA9Q7RTU4 235 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 TMEM110Q86TL2 294 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 CPA6Q8N4T0 437 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 TMEM35BQ8NCS4 154 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 FLCNQ8NFG4 579 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 GOLGA1Q92805 767 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 EXOC4Q96A65 974 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 ZFRQ96KR1 1074 aaKnown RBP13.17□□□□□ -0.3
VEGFA-225ENST00000523950 KCNH6Q9H252 994 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 ACP6Q9NPH0 428 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 SMPD4Q9NXE4 827 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 LSM7Q9UK45 103 aaKnown RBP13.17□□□□□ -0.3
VEGFA-225ENST00000523950 STRIP2Q9ULQ0 834 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 MYO6Q9UM54 1294 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 SH3BP1Q9Y3L3 701 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 PIAS3Q9Y6X2 628 aa13.17□□□□□ -0.3
VEGFA-225ENST00000523950 EPHB6O15197 1021 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 NCAM2O15394 837 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 TEX33O43247 280 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 LSM8O95777 96 aaKnown RBP13.16□□□□□ -0.3
VEGFA-225ENST00000523950 PDGFBP01127 241 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-225ENST00000523950 CCDC172P0C7W6 258 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 CDH5P33151 784 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-225ENST00000523950 ZNF445P59923 1031 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 COG7P83436 770 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 FANCCQ00597 558 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 NR1H3Q13133 447 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 NR1I3Q14994 352 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 EML3Q32P44 896 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 C10orf120Q5SQS8 335 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 BSPRYQ5W0U4 402 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 RSRC2Q7L4I2 434 aaKnown RBP13.16□□□□□ -0.3
VEGFA-225ENST00000523950 CACNA2D4Q7Z3S7 1137 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 PJA1Q8NG27 643 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 EPS8L1Q8TE68 723 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 IPO4Q8TEX9 1081 aaKnown RBP13.16□□□□□ -0.3
VEGFA-225ENST00000523950 RNF139Q8WU17 664 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 ZFYVE19Q96K21 471 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 PRRX2Q99811 253 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 KLF16Q9BXK1 252 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-225ENST00000523950 PDCL3Q9H2J4 239 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 LTB4R2Q9NPC1 389 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 NLRC4Q9NPP4 1024 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 HPS4Q9NQG7 708 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 ST7Q9NRC1 585 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 CFAP97Q9P2B7 532 aa13.16□□□□□ -0.3
VEGFA-225ENST00000523950 YJEFN3A6XGL0 299 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 E7ENQ6 273 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 SPECC1L-ADORA2AF8WAN1 911 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 STK25O00506 426 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 GABBR2O75899 941 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 GFPT2O94808 682 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 TBX18O95935 607 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 LTFP02788 710 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 GLI1P08151 1106 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 AVPR2P30518 371 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 CTHP32929 405 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 FIGNQ5HY92 759 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 IER5LQ5T953 404 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 MSANTD2Q6P1R3 559 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 TRIM72Q6ZMU5 477 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 HTR3DQ70Z44 454 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 ZDHHC17Q8IUH5 632 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 WDTC1Q8N5D0 677 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 MSANTD4Q8NCY6 345 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 DDX1Q92499 740 aaKnown RBP13.15□□□□□ -0.3
VEGFA-225ENST00000523950 FAM3CQ92520 227 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 IQCDQ96DY2 449 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 PPP1R13BQ96KQ4 1090 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 NAP1L5Q96NT1 182 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-225ENST00000523950 IER2Q9BTL4 223 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 EDEM3Q9BZQ6 932 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 DCLK3Q9C098 648 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 MIS12Q9H081 205 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 EBF3Q9H4W6 596 aa13.15□□□□□ -0.3
VEGFA-225ENST00000523950 ECT2Q9H8V3 914 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms