RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 ALLCQ8N6M5 410 aa21.68■■□□□ 1.06
SQLE-206ENST00000523430 B3GALT6Q96L58 329 aa21.68■■□□□ 1.06
SQLE-206ENST00000523430 NPY6RQ99463 290 aa21.68■■□□□ 1.06
SQLE-206ENST00000523430 MAGEB5Q9BZ81 275 aa21.68■■□□□ 1.06
SQLE-206ENST00000523430 POPDC2Q9HBU9 364 aa21.68■■□□□ 1.06
SQLE-206ENST00000523430 ADAM28Q9UKQ2 775 aa21.68■■□□□ 1.06
SQLE-206ENST00000523430 TBX21Q9UL17 535 aa21.68■■□□□ 1.06
SQLE-206ENST00000523430 VWA8A3KMH1 1905 aa21.68■■□□□ 1.06
SQLE-206ENST00000523430 TTC3P53804 2025 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 SYNJ2BP-COX16A0A087WUM0 186 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 TBKBP1A7MCY6 615 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 OAZ2O95190 189 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 ZBED1O96006 694 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 KRT14P02533 472 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 NOS2P35228 1153 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 DHX9Q08211 1270 aaKnown RBP21.67■■□□□ 1.06
SQLE-206ENST00000523430 PDK2Q15119 407 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 SLC39A12Q504Y0 691 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 PPP6R3Q5H9R7 873 aaPredicted RBP21.67■■□□□ 1.06
SQLE-206ENST00000523430 VARS2Q5ST30 1063 aaKnown RBP21.67■■□□□ 1.06
SQLE-206ENST00000523430 ERMARDQ5T6L9 678 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 NPNTQ6UXI9 565 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 BNIPLQ7Z465 357 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 SPATA2LQ8IUW3 424 aaPredicted RBP21.67■■□□□ 1.06
SQLE-206ENST00000523430 NT5C3BQ969T7 300 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 LRRC45Q96CN5 670 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 SNF8Q96H20 258 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 TMEM121Q9BTD3 319 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 TXLNGYQ9BZA5 131 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 ZCWPW1Q9H0M4 648 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 C10orf88Q9H8K7 445 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 COX16Q9P0S2 106 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 WHRNQ9P202 907 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 AP4E1Q9UPM8 1137 aa21.67■■□□□ 1.06
SQLE-206ENST00000523430 COL4A4P53420 1690 aaPredicted RBP21.67■■□□□ 1.06
SQLE-206ENST00000523430 APOC4-APOC2K7ER74 178 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 TRAPPC3O43617 180 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 APOC2P02655 101 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 ZSCAN5DPP0CG00 497 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 ETS1P14921 441 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 CALCOCO2Q13137 446 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 CFAP58Q5T655 872 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 C1orf53Q5VUE5 145 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.66■■□□□ 1.065e-11■■■■■ 30.7
SQLE-206ENST00000523430 RNF157Q96PX1 679 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 GPR62Q9BZJ7 368 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 STAP1Q9ULZ2 295 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 MKI67P46013 3256 aaKnown RBP21.66■■□□□ 1.06
SQLE-206ENST00000523430 MICAL3Q7RTP6 2002 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 HOXA2O43364 376 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 PPFIA2O75334 1257 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 ITGAVP06756 1048 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 CYP2F1P24903 491 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 ADCY8P40145 1251 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 DPYSL2Q16555 572 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 ANKRD20A8PQ5CZ79 823 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 ALS2CLQ60I27 953 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 TMEM173Q86WV6 379 aaPredicted RBP21.66■■□□□ 1.06
SQLE-206ENST00000523430 MAP7D3Q8IWC1 876 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 IQCKQ8N0W5 287 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 PQLC3Q8N755 202 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 TTC13Q8NBP0 860 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 ADAM32Q8TC27 787 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 FAM71BQ8TC56 605 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 KCTD15Q96SI1 283 aaPredicted RBP21.66■■□□□ 1.06
SQLE-206ENST00000523430 ZNF670Q9BS34 389 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 MAK16Q9BXY0 300 aaKnown RBP21.66■■□□□ 1.06
SQLE-206ENST00000523430 DHX35Q9H5Z1 703 aaKnown RBP21.66■■□□□ 1.06
SQLE-206ENST00000523430 MED4Q9NPJ6 270 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 ATP8A1Q9Y2Q0 1164 aa21.66■■□□□ 1.06
SQLE-206ENST00000523430 M0QYT0 321 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 SYN3O14994 580 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 POLR3GO15318 223 aaPredicted RBP21.65■■□□□ 1.06
SQLE-206ENST00000523430 L1CAMP32004 1257 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 RDXP35241 583 aaKnown RBP21.65■■□□□ 1.06
SQLE-206ENST00000523430 LMNB2Q03252 620 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 NME3Q13232 169 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 HSP90B2PQ58FF3 399 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 FAM171A1Q5VUB5 890 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 FBXO46Q6PJ61 603 aaPredicted RBP21.65■■□□□ 1.06
SQLE-206ENST00000523430 C4orf50Q6ZRC1 276 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 CEP57Q86XR8 500 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 CCDC89Q8N998 374 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 PCDH19Q8TAB3 1148 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.65■■□□□ 1.06
SQLE-206ENST00000523430 UBLCP1Q8WVY7 318 aaPredicted RBP21.65■■□□□ 1.06
SQLE-206ENST00000523430 VWCEQ96DN2 955 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 TMPRSS4Q9NRS4 437 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 PIGVQ9NUD9 493 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 MTMR10Q9NXD2 777 aa21.65■■□□□ 1.06
SQLE-206ENST00000523430 ABI2Q9NYB9 513 aaPredicted RBP21.65■■□□□ 1.06
SQLE-206ENST00000523430 DRG1Q9Y295 367 aaKnown RBP21.65■■□□□ 1.06
SQLE-206ENST00000523430 FNDC1Q4ZHG4 1894 aaPredicted RBP21.65■■□□□ 1.06
SQLE-206ENST00000523430 NT5C1B-RDH14C9J2C7 533 aa21.64■■□□□ 1.06
SQLE-206ENST00000523430 CAPN9O14815 690 aa21.64■■□□□ 1.06
SQLE-206ENST00000523430 PARNO95453 639 aaKnown RBP21.64■■□□□ 1.06
SQLE-206ENST00000523430 LTFP02788 710 aa21.64■■□□□ 1.06
SQLE-206ENST00000523430 ITGA8P53708 1063 aa21.64■■□□□ 1.06
SQLE-206ENST00000523430 GDF10P55107 478 aa21.64■■□□□ 1.06
SQLE-206ENST00000523430 PYROXD2Q8N2H3 581 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms