RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 NAGPAQ9UK23 515 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 EP300Q09472 2414 aaPredicted RBP11.48□□□□□ -0.57
PVT1-216ENST00000523068 DMXL1Q9Y485 3027 aa11.48□□□□□ -0.57
PVT1-216ENST00000523068 A0A0A0MRY4 1105 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 A0A1W2PQH9 124 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 K7EQS6 105 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 SCAMP3O14828 347 aaKnown RBP11.47□□□□□ -0.57
PVT1-216ENST00000523068 AXIN1O15169 862 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 PMM2O15305 246 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 KAT7O95251 611 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 IRF1P10914 325 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 RALAP11233 206 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 RARGP13631 454 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 GRIA2P42262 883 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 TNFRSF4P43489 277 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 PLA2G4AP47712 749 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 PXNP49023 591 aaPredicted RBP11.47□□□□□ -0.57
PVT1-216ENST00000523068 FMO5P49326 533 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 SEC13P55735 322 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 SPEM2Q0P670 501 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 SRSF5Q13243 272 aaKnown RBP11.47□□□□□ -0.57
PVT1-216ENST00000523068 ANO4Q32M45 955 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 C2orf27AQ580R0 203 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 C10orf120Q5SQS8 335 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 KLHL10Q6JEL2 608 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 HTR3DQ70Z44 454 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 CACNA2D4Q7Z3S7 1137 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 BBS7Q8IWZ6 715 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 ARHGAP18Q8N392 663 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 FAM160A2Q8N612 972 aaPredicted RBP11.47□□□□□ -0.57
PVT1-216ENST00000523068 ANKRD52Q8NB46 1076 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 USP33Q8TEY7 942 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 RMDN1Q96DB5 314 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 LOXL4Q96JB6 756 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 HHIPQ96QV1 700 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 ARID3AQ99856 593 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 KLF16Q9BXK1 252 aaPredicted RBP11.47□□□□□ -0.57
PVT1-216ENST00000523068 ARHGEF4Q9NR80 690 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.47□□□□□ -0.57
PVT1-216ENST00000523068 CLIC5Q9NZA1 410 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 EBF1Q9UH73 591 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 MMP17Q9ULZ9 603 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 USP3Q9Y6I4 520 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 DCHS1Q96JQ0 3298 aa11.47□□□□□ -0.57
PVT1-216ENST00000523068 SPTBN4Q9H254 2564 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 P4HA2O15460 535 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 HOXC11O43248 304 aaPredicted RBP11.46□□□□□ -0.57
PVT1-216ENST00000523068 FGFR1OPO95684 399 aaKnown RBP11.46□□□□□ -0.57
PVT1-216ENST00000523068 GNA14O95837 355 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 TBX18O95935 607 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 CD44P16070 742 aaKnown RBP11.46□□□□□ -0.57
PVT1-216ENST00000523068 SLC6A11P48066 632 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 PGFP49763 221 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 BCAT1P54687 386 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 MORC3Q14149 939 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 SGO2Q562F6 1265 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 TTI2Q6NXR4 508 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 CAVIN1Q6NZI2 390 aaKnown RBP11.46□□□□□ -0.57
PVT1-216ENST00000523068 TSTD1Q8NFU3 115 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 KCNV2Q8TDN2 545 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 NELFBQ8WX92 580 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 NT5C1BQ96P26 610 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 XPO6Q96QU8 1125 aaKnown RBP11.46□□□□□ -0.57
PVT1-216ENST00000523068 NMUR1Q9HB89 426 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 OSER1Q9NX31 292 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 DLL3Q9NYJ7 618 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 WDR35Q9P2L0 1181 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 DEC1Q9P2X7 70 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 HESX1Q9UBX0 185 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 KIAA1257Q9ULG3 409 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 ZNF510Q9Y2H8 683 aa11.46□□□□□ -0.57
PVT1-216ENST00000523068 TBC1D3BA6NDS4 549 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 PPP1R3GB7ZBB8 358 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 XPO1O14980 1071 aaKnown RBP11.45□□□□□ -0.58
PVT1-216ENST00000523068 GADD45BO75293 160 aaPredicted RBP11.45□□□□□ -0.58
PVT1-216ENST00000523068 ALDH1A2O94788 518 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 VDRP11473 427 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 CD19P15391 556 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 TGM1P22735 817 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 HOXC13P31276 330 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 DGKEP52429 567 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 COG7P83436 770 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 KDSRQ06136 332 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 BST2Q10589 180 aaKnown RBP11.45□□□□□ -0.58
PVT1-216ENST00000523068 PAK1Q13153 545 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 CSRP2Q16527 193 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 RSPO4Q2I0M5 234 aaPredicted RBP11.45□□□□□ -0.58
PVT1-216ENST00000523068 RAB41Q5JT25 222 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 EOGTQ5NDL2 527 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 DGLUCYQ7Z3D6 616 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 TRMT11Q7Z4G4 463 aaKnown RBP11.45□□□□□ -0.58
PVT1-216ENST00000523068 PIGZQ86VD9 579 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 C11orf74Q86VG3 221 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 C12orf40Q86WS4 652 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 ETFBKMTQ8IXQ9 262 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 NAT16Q8N8M0 369 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 TRIML1Q8N9V2 468 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 GPT2Q8TD30 523 aa11.45□□□□□ -0.58
PVT1-216ENST00000523068 ZC3H10Q96K80 434 aaKnown RBP11.45□□□□□ -0.58
PVT1-216ENST00000523068 PARD6AQ9NPB6 346 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms