RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 DDX42Q86XP3 938 aaKnown RBP eCLIP3.29□□□□□ -1.88
PCM1-217ENST00000522998 SPARTQ8N0X7 666 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 TRMT61AQ96FX7 289 aaKnown RBP3.29□□□□□ -1.88
PCM1-217ENST00000522998 SLC35A4Q96G79 324 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 RBM38Q9H0Z9 239 aaKnown RBP3.29□□□□□ -1.88
PCM1-217ENST00000522998 CD93Q9NPY3 652 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 PLSCR4Q9NRQ2 329 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 MSRB1Q9NZV6 116 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 TRIP12Q14669 1992 aaPredicted RBP3.29□□□□□ -1.88
PCM1-217ENST00000522998 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.28□□□□□ -1.88
PCM1-217ENST00000522998 PLAUP00749 431 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 CGAP01215 116 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 THP07101 528 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 RHCEP18577 417 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 PRKAR1BP31321 381 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 MLH1P40692 756 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 KCNJ4P48050 445 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 MTHFSP49914 203 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 CDKN1CP49918 316 aaPredicted RBP3.28□□□□□ -1.88
PCM1-217ENST00000522998 BCAT1P54687 386 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 NKX6-1P78426 367 aaPredicted RBP3.28□□□□□ -1.88
PCM1-217ENST00000522998 PTCHD3Q3KNS1 767 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 PLA1AQ53H76 456 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 NADSYN1Q6IA69 706 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 CELF5Q8N6W0 485 aaKnown RBP3.28□□□□□ -1.88
PCM1-217ENST00000522998 JPH3Q8WXH2 748 aaPredicted RBP3.28□□□□□ -1.88
PCM1-217ENST00000522998 SF3B5Q9BWJ5 86 aaKnown RBP3.28□□□□□ -1.88
PCM1-217ENST00000522998 TM2D2Q9BX73 214 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 TRHDEQ9UKU6 1024 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 PCDHA12Q9UN75 941 aa3.28□□□□□ -1.88
PCM1-217ENST00000522998 ALG1L2C9J202 215 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 AKAP10O43572 662 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 PAPSS2O95340 614 aaPredicted RBP3.27□□□□□ -1.89
PCM1-217ENST00000522998 CDK11BP21127 795 aaKnown RBP3.27□□□□□ -1.89
PCM1-217ENST00000522998 IBSPP21815 317 aaPredicted RBP3.27□□□□□ -1.89
PCM1-217ENST00000522998 EPHA3P29320 983 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 HOXA11P31270 313 aaPredicted RBP3.27□□□□□ -1.89
PCM1-217ENST00000522998 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 EGR4Q05215 589 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 KPNB1Q14974 876 aaKnown RBP3.27□□□□□ -1.89
PCM1-217ENST00000522998 ODF1Q14990 250 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 RBM23Q86U06 439 aaKnown RBP3.27□□□□□ -1.89
PCM1-217ENST00000522998 PRR18Q8N4B5 295 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 SLC15A4Q8N697 577 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 DNAJC5GQ8N7S2 189 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 C12orf76Q8N812 135 aaPredicted RBP3.27□□□□□ -1.89
PCM1-217ENST00000522998 PRPF38AQ8NAV1 312 aaKnown RBP3.27□□□□□ -1.89
PCM1-217ENST00000522998 SLC44A5Q8NCS7 719 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 NGDNQ8NEJ9 315 aaKnown RBP3.27□□□□□ -1.89
PCM1-217ENST00000522998 BCAS4Q8TDM0 211 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 OIT3Q8WWZ8 545 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 EDC3Q96F86 508 aaKnown RBP3.27□□□□□ -1.89
PCM1-217ENST00000522998 VN1R3Q9BXE9 311 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 TYW1Q9NV66 732 aaKnown RBP3.27□□□□□ -1.89
PCM1-217ENST00000522998 ZSCAN32Q9NX65 697 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 MED16Q9Y2X0 877 aa3.27□□□□□ -1.89
PCM1-217ENST00000522998 SIRT4Q9Y6E7 314 aaPredicted RBP3.27□□□□□ -1.89
PCM1-217ENST00000522998 hCG_2014768A0A024R1R8 64 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 F8W810 466 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 GABRDO14764 452 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 FYB1O15117 783 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 USP12O75317 370 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 ZRANB2O95218 330 aaKnown RBP eCLIP3.26□□□□□ -1.89
PCM1-217ENST00000522998 ODF3L2Q3SX64 289 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 SLC39A5Q6ZMH5 540 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 USP45Q70EL2 814 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 TRAPPC11Q7Z392 1133 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 DNAJB14Q8TBM8 379 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 MTFMTQ96DP5 389 aaKnown RBP3.26□□□□□ -1.89
PCM1-217ENST00000522998 WDYHV1Q96HA8 205 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 KAZALD1Q96I82 304 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 NUAK2Q9H093 628 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 ARL8BQ9NVJ2 186 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 WNT16Q9UBV4 365 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 ANAPC4Q9UJX5 808 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 EVPLQ92817 2033 aa3.26□□□□□ -1.89
PCM1-217ENST00000522998 A0A087WWL8 130 aa3.25□□□□□ -1.89
PCM1-217ENST00000522998 A0A1W2PPC1 479 aa3.25□□□□□ -1.89
PCM1-217ENST00000522998 RRHO14718 337 aa3.25□□□□□ -1.89
PCM1-217ENST00000522998 ACAA1P09110 424 aaPredicted RBP3.25□□□□□ -1.89
PCM1-217ENST00000522998 SLC12A2P55011 1212 aa3.25□□□□□ -1.89
PCM1-217ENST00000522998 TIRAPP58753 221 aa3.25□□□□□ -1.89
PCM1-217ENST00000522998 IGBP1P78318 339 aa3.25□□□□□ -1.89
PCM1-217ENST00000522998 LMBRD2Q68DH5 695 aaPredicted RBP3.25□□□□□ -1.89
PCM1-217ENST00000522998 RAPGEF4Q8WZA2 1011 aa3.25□□□□□ -1.89
PCM1-217ENST00000522998 FCRL5Q96RD9 977 aa3.25□□□□□ -1.89
PCM1-217ENST00000522998 MS4A7Q9GZW8 240 aaPredicted RBP3.25□□□□□ -1.89
PCM1-217ENST00000522998 TRIM36Q9NQ86 728 aa3.25□□□□□ -1.89
PCM1-217ENST00000522998 CNNM1Q9NRU3 951 aa3.25□□□□□ -1.89
PCM1-217ENST00000522998 DNMT3BQ9UBC3 853 aaKnown RBP3.25□□□□□ -1.89
PCM1-217ENST00000522998 CPA4Q9UI42 421 aa3.25□□□□□ -1.89
PCM1-217ENST00000522998 FER1L4A9Z1Z3 1794 aa3.25□□□□□ -1.89
PCM1-217ENST00000522998 SLC22A23A1A5C7 686 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 SOCS5O75159 536 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 UQCRC1P31930 480 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 ANAPC15P60006 121 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 PGS1Q32NB8 556 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 NUGGCQ68CJ6 796 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 ANKRD13AQ8IZ07 590 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 LMO3Q8TAP4 145 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms