RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 C1orf220Q5T0J3 134 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 DAB2IPQ5VWQ8 1189 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 EGFLAMQ63HQ2 1017 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 SV2AQ7L0J3 742 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 LPCAT2Q7L5N7 544 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 ETFBKMTQ8IXQ9 262 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 GOLGA5Q8TBA6 731 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 OVCA2Q8WZ82 227 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 SPACA7Q96KW9 195 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 ACOX2Q99424 681 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 DNAJC17Q9NVM6 304 aaKnown RBP16.31■□□□□ 0.2
MRPS28-209ENST00000522987 OSER1Q9NX31 292 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 DEC1Q9P2X7 70 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 HCN2Q9UL51 889 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 PCNX2A6NKB5 2137 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 ZDHHC11BP0C7U3 371 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 PDIA4P13667 645 aaKnown RBP16.3■□□□□ 0.2
MRPS28-209ENST00000522987 P4HA1P13674 534 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 HOXB2P14652 356 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 ITPKAP23677 461 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 TNFRSF4P43489 277 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 ASPAP45381 313 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 AP3M2P53677 418 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 CLDN10P78369 228 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 SGSM1Q2NKQ1 1148 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 MAP7D1Q3KQU3 841 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 ZACNQ401N2 412 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 TOGARAM2Q6ZUX3 1019 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 TERB1Q8NA31 727 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 DEFB124Q8NES8 71 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 SNX21Q969T3 373 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 BBS2Q9BXC9 721 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 SLC6A17Q9H1V8 727 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 NMUR1Q9HB89 426 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 CD93Q9NPY3 652 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 PLK2Q9NYY3 685 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 IL37Q9NZH6 218 aa16.3■□□□□ 0.2
MRPS28-209ENST00000522987 FRYQ5TBA9 3013 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 A0A1W2PQH9 124 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 HOXC11O43248 304 aaPredicted RBP16.29■□□□□ 0.2
MRPS28-209ENST00000522987 CFIP05156 583 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 FAM200BP0CF97 657 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 GABRG2P18507 467 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 ACO1P21399 889 aaKnown RBP16.29■□□□□ 0.2
MRPS28-209ENST00000522987 GCLMP48507 274 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 SNX30Q5VWJ9 437 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 GRAMD4Q6IC98 578 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 KIAA1211LQ6NV74 962 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 CLEC20AQ6ZU45 233 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 C11orf74Q86VG3 221 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 OTUB2Q96DC9 234 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 KLF16Q9BXK1 252 aaPredicted RBP16.29■□□□□ 0.2
MRPS28-209ENST00000522987 APOBEC3GQ9HC16 384 aaKnown RBP16.29■□□□□ 0.2
MRPS28-209ENST00000522987 TLR8Q9NR97 1041 aaKnown RBP16.29■□□□□ 0.2
MRPS28-209ENST00000522987 CALCOCO1Q9P1Z2 691 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 RCOR1Q9UKL0 485 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 CFAP45Q9UL16 551 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 RAD54BQ9Y620 910 aa16.29■□□□□ 0.2
MRPS28-209ENST00000522987 CACNA1EQ15878 2313 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 A0A0A0MRY4 1105 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 C1QTNF9BB2RNN3 333 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 PDXKO00764 312 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 ASS1P00966 412 aaKnown RBP16.28■□□□□ 0.2
MRPS28-209ENST00000522987 RPN1P04843 607 aaKnown RBP16.28■□□□□ 0.2
MRPS28-209ENST00000522987 HMBSP08397 361 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 C1QTNF9P0C862 333 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 TYRP14679 529 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 TUBP50607 506 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 VAMP7P51809 220 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 RPL6Q02878 288 aaKnown RBP16.28■□□□□ 0.2
MRPS28-209ENST00000522987 PPP3CAQ08209 521 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 ZNF394Q53GI3 561 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 LYSMD4Q5XG99 296 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 SLC9A9Q8IVB4 645 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 CRYBG2Q8N1P7 616 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 KIAA1958Q8N8K9 716 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 OR2I1PQ8NGU4 316 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 TMC2Q8TDI7 906 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 TAS1R2Q8TE23 839 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 CYFIP2Q96F07 1278 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 EEF2KMTQ96G04 330 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 GTPBP2Q9BX10 602 aaKnown RBP16.28■□□□□ 0.2
MRPS28-209ENST00000522987 FBXO44Q9H4M3 255 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 CSNK1G1Q9HCP0 422 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 CYP8B1Q9UNU6 501 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 FRMD4BQ9Y2L6 1034 aa16.28■□□□□ 0.2
MRPS28-209ENST00000522987 PCDH15Q96QU1 1955 aa16.27■□□□□ 0.2
MRPS28-209ENST00000522987 FAM92AA1XBS5 289 aa16.27■□□□□ 0.2
MRPS28-209ENST00000522987 PRRT4C9JH25 899 aa16.27■□□□□ 0.2
MRPS28-209ENST00000522987 HHLA1C9JL84 531 aa16.27■□□□□ 0.2
MRPS28-209ENST00000522987 CALUO43852 315 aaPredicted RBP16.27■□□□□ 0.2
MRPS28-209ENST00000522987 GREM1O60565 184 aa16.27■□□□□ 0.2
MRPS28-209ENST00000522987 RARGP13631 454 aa16.27■□□□□ 0.2
MRPS28-209ENST00000522987 ENGP17813 658 aa16.27■□□□□ 0.2
MRPS28-209ENST00000522987 ATP5C1P36542 298 aaKnown RBP16.27■□□□□ 0.2
MRPS28-209ENST00000522987 HSF5Q4G112 596 aaPredicted RBP16.27■□□□□ 0.2
MRPS28-209ENST00000522987 C10orf120Q5SQS8 335 aa16.27■□□□□ 0.2
MRPS28-209ENST00000522987 CHPFQ8IZ52 775 aa16.27■□□□□ 0.2
MRPS28-209ENST00000522987 NUSAP1Q9BXS6 441 aaKnown RBP16.27■□□□□ 0.2
MRPS28-209ENST00000522987 COMMD8Q9NX08 183 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms