RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, human

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-215	ENST00000522963	VCPIP1	Q96JH7	1222 aa		12.52	□□□□□ -0.41
PVT1-215	ENST00000522963	THAP2	Q9H0W7	228 aa		12.52	□□□□□ -0.41
PVT1-215	ENST00000522963	CNGB3	Q9NQW8	809 aa		12.52	□□□□□ -0.41
PVT1-215	ENST00000522963	COMMD8	Q9NX08	183 aa		12.52	□□□□□ -0.41
PVT1-215	ENST00000522963	SORCS3	Q9UPU3	1222 aa		12.52	□□□□□ -0.41
PVT1-215	ENST00000522963	ADGRG1	Q9Y653	693 aa		12.52	□□□□□ -0.41
PVT1-215	ENST00000522963	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
PVT1-215	ENST00000522963	NUMBL	Q9Y6R0	609 aa		12.52	□□□□□ -0.41
PVT1-215	ENST00000522963	TCRBV5S1A1T	A0A578	114 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	ANKRD62	A6NC57	917 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	RCCD1	A6NED2	376 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	ATMIN	O43313	823 aa	Predicted RBP	12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	MOSPD3	O75425	235 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	FBXO21	O94952	628 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	RRM1	P23921	792 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	YWHAQ	P27348	245 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	GSC	P56915	257 aa	Predicted RBP	12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	SNX16	P57768	344 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	DAOA	P59103	153 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	KRT83	P78385	493 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	TAF10	Q12962	218 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	TDG	Q13569	410 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	ZNF268	Q14587	947 aa	Predicted RBP	12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	ARHGAP15	Q53QZ3	475 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	C10orf76	Q5T2E6	689 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	STXBP5	Q5T5C0	1151 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	GPR158	Q5T848	1215 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	GAREM2	Q75VX8	874 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	SCML4	Q8N228	414 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	FGF14	Q92915	247 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	FBXO32	Q969P5	355 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	MYRFL	Q96LU7	910 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	ZSWIM3	Q96MP5	696 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	RPP25	Q9BUL9	199 aa	Known RBP	12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	LRRC3	Q9BY71	257 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	FBXO44	Q9H4M3	255 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	AVEN	Q9NQS1	362 aa	Predicted RBP	12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	GMIP	Q9P107	970 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	IGSF9	Q9P2J2	1179 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	CNOT8	Q9UFF9	292 aa	Known RBP	12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	CHORDC1	Q9UHD1	332 aa	Predicted RBP	12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	STRIP2	Q9ULQ0	834 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	PYCARD	Q9ULZ3	195 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	TFR2	Q9UP52	801 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	SCML2	Q9UQR0	700 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	12.51	□□□□□ -0.41
PVT1-215	ENST00000522963	NCAN	O14594	1321 aa		12.51	□□□□□ -0.41
PVT1-215	ENST00000522963		A0A0U1RQJ8	604 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	YJEFN3	A6XGL0	299 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963		E7ENQ6	273 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	GOLGA8S	H3BPF8	625 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	NARS	O43776	548 aa	Known RBP	12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	IPO7	O95373	1038 aa	Known RBP	12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	GJB6	O95452	261 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	FGF19	O95750	216 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	CYP1A2	P05177	515 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	TMEM253	P0C7T8	217 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	MYBL1	P10243	752 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	CDC25C	P30307	473 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	PGF	P49763	221 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	VAV2	P52735	878 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	EPHA5	P54756	1037 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	GPC5	P78333	572 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	SLC6A3	Q01959	620 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	HTR4	Q13639	388 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	TAF5	Q15542	800 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	FAM78A	Q5JUQ0	283 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	FAM102A	Q5T9C2	384 aa	Predicted RBP	12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	PLEKHA7	Q6IQ23	1121 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	POTEH	Q6S545	545 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	HFE2	Q6ZVN8	426 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	MTSS1L	Q765P7	747 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	SCD5	Q86SK9	330 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	ZDHHC17	Q8IUH5	632 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	SLC44A3	Q8N4M1	653 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	C3orf20	Q8ND61	904 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	TTC16	Q8NEE8	873 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	ATRIP	Q8WXE1	791 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	IRGQ	Q8WZA9	623 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	EDA	Q92838	391 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	TRIM11	Q96F44	468 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	TRMT2B	Q96GJ1	504 aa	Known RBP	12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	IL21	Q9HBE4	155 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	TRPC7	Q9HCX4	862 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	GDE1	Q9NZC3	331 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	WDR35	Q9P2L0	1181 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	MYO1A	Q9UBC5	1043 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	FBXL21	Q9UKT6	434 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	INTU	Q9ULD6	942 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	GREB1	Q4ZG55	1949 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	DENND4C	Q5VZ89	1909 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963	TECTA	O75443	2155 aa		12.5	□□□□□ -0.41
PVT1-215	ENST00000522963		A0A1W2PQH9	124 aa		12.49	□□□□□ -0.41
PVT1-215	ENST00000522963	TADA3	O75528	432 aa		12.49	□□□□□ -0.41
PVT1-215	ENST00000522963	GRAP2	O75791	330 aa		12.49	□□□□□ -0.41
PVT1-215	ENST00000522963	ABL1	P00519	1130 aa		12.49	□□□□□ -0.41
PVT1-215	ENST00000522963	ZDHHC11B	P0C7U3	371 aa		12.49	□□□□□ -0.41
PVT1-215	ENST00000522963	SCNN1A	P37088	669 aa		12.49	□□□□□ -0.41
PVT1-215	ENST00000522963	VIPR2	P41587	438 aa		12.49	□□□□□ -0.41

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