RNA–Protein interactions for RNA: ENST00000522501.1

CDKL3-208, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 3

Gene CDKL3, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-208ENST00000522501 USP49Q70CQ1 688 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 ARMCX6Q7L4S7 300 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 LRRTM3Q86VH5 581 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 CNGA4Q8IV77 575 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 EFCAB13Q8IY85 973 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 CHCHD4Q8N4Q1 142 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 C4orf32Q8N8J7 132 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 ZNF397Q8NF99 534 aaPredicted RBP9.19□□□□□ -0.94
CDKL3-208ENST00000522501 WHAMMQ8TF30 809 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 NOC3LQ8WTT2 800 aaKnown RBP9.19□□□□□ -0.94
CDKL3-208ENST00000522501 BICD1Q96G01 975 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 SLC22A12Q96S37 553 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 RAB34Q9BZG1 259 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 TMEM74BQ9NUR3 256 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 INTS13Q9NVM9 706 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 UXTQ9UBK9 157 aaPredicted RBP9.19□□□□□ -0.94
CDKL3-208ENST00000522501 DNAI1Q9UI46 699 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 MBD1Q9UIS9 605 aaPredicted RBP9.19□□□□□ -0.94
CDKL3-208ENST00000522501 PILRBQ9UKJ0 227 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 DNM3Q9UQ16 869 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 CTNND2Q9UQB3 1225 aa9.19□□□□□ -0.94
CDKL3-208ENST00000522501 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.19□□□□□ -0.94
CDKL3-208ENST00000522501 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 TRAV19A0A0A6YYK7 116 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 SFI1A8K8P3 1242 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 PP2D1A8MPX8 630 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 H0YCG3 227 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 RPN1P04843 607 aaKnown RBP9.18□□□□□ -0.94
CDKL3-208ENST00000522501 CCDC175P0C221 793 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 USP17L7P0C7H9 530 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 CDC25AP30304 524 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 TAF6P49848 677 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 RAD51AP2Q09MP3 1159 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 CKAP5Q14008 2032 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 PDIA5Q14554 519 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 KCNB1Q14721 858 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 NR1I3Q14994 352 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 TMEM132DQ14C87 1099 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 COL28A1Q2UY09 1125 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 RRAGBQ5VZM2 374 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 LYSMD4Q5XG99 296 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 KLHL10Q6JEL2 608 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 METTL23Q86XA0 190 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 CD302Q8IX05 232 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 TMEFF1Q8IYR6 380 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 DCP1BQ8IZD4 617 aaKnown RBP9.18□□□□□ -0.94
CDKL3-208ENST00000522501 SH3RF2Q8TEC5 729 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 MYRFLQ96LU7 910 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 RPF1Q9H9Y2 349 aaKnown RBP9.18□□□□□ -0.94
CDKL3-208ENST00000522501 CAPN10Q9HC96 672 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 TRPC7Q9HCX4 862 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 TMLHEQ9NVH6 421 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 LIMA1Q9UHB6 759 aaKnown RBP9.18□□□□□ -0.94
CDKL3-208ENST00000522501 KCNG1Q9UIX4 513 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 CPSF3Q9UKF6 684 aaKnown RBP9.18□□□□□ -0.94
CDKL3-208ENST00000522501 MAGED2Q9UNF1 606 aaPredicted RBP9.18□□□□□ -0.94
CDKL3-208ENST00000522501 PPP2R2CQ9Y2T4 447 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 DERAQ9Y315 318 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 PCDHB5Q9Y5E4 795 aa9.18□□□□□ -0.94
CDKL3-208ENST00000522501 A0A0B4J269 797 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 CYB561D2O14569 222 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 PSMA7O14818 248 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 MFAP3LO75121 409 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 ALDH1A2O94788 518 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 S1PR4O95977 384 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 CYP17A1P05093 508 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 CFIP05156 583 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 ITPKAP23677 461 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 UBA7P41226 1012 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 LIG4P49917 911 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 MRPS21P82921 87 aaKnown RBP9.17□□□□□ -0.94
CDKL3-208ENST00000522501 SCAPQ12770 1279 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 KCNH2Q12809 1159 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 NR1H3Q13133 447 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 MAP7D1Q3KQU3 841 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 HSF5Q4G112 596 aaPredicted RBP9.17□□□□□ -0.94
CDKL3-208ENST00000522501 HYIQ5T013 277 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 SDHAF4Q5VUM1 108 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 KRT79Q5XKE5 535 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 WSCD1Q658N2 575 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 SLC39A4Q6P5W5 647 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 C19orf48Q6RUI8 117 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 TMEM139Q8IV31 216 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 THEM5Q8N1Q8 247 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 HDDC3Q8N4P3 179 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 MINDY1Q8N5J2 469 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 CCDC33Q8N5R6 958 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 ALLCQ8N6M5 410 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 FRMD1Q8N878 549 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 TC2NQ8N9U0 490 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 TTC16Q8NEE8 873 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 MNS1Q8NEH6 495 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 RLN3Q8WXF3 142 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 BBC3Q96PG8 261 aaPredicted RBP9.17□□□□□ -0.94
CDKL3-208ENST00000522501 PI4K2AQ9BTU6 479 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 MMTAG2Q9BU76 263 aaKnown RBP9.17□□□□□ -0.94
CDKL3-208ENST00000522501 ABCB6Q9NP58 842 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 FSCN3Q9NQT6 498 aa9.17□□□□□ -0.94
CDKL3-208ENST00000522501 SAMSN1Q9NSI8 373 aaKnown RBP9.17□□□□□ -0.94
CDKL3-208ENST00000522501 ARGLU1Q9NWB6 273 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms