RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SDC4P31431 198 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 NOS2P35228 1153 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 MATKP42679 507 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 ALDH1A3P47895 512 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 YWHAZP63104 245 aaKnown RBP13.67□□□□□ -0.22
CPNE3-205ENST00000522240 OGDHQ02218 1023 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 SDHAF4Q5VUM1 108 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 TRNP1Q6NT89 227 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 SCAMP5Q8TAC9 235 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 HDAC7Q8WUI4 952 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 RXFP2Q8WXD0 754 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 OVCA2Q8WZ82 227 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 CD101Q93033 1021 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 TRMT2BQ96GJ1 504 aaKnown RBP13.67□□□□□ -0.22
CPNE3-205ENST00000522240 DDX23Q9BUQ8 820 aaKnown RBP13.67□□□□□ -0.22
CPNE3-205ENST00000522240 GOLPH3Q9H4A6 298 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.67□□□□□ -0.22
CPNE3-205ENST00000522240 STAP1Q9ULZ2 295 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 CDH23Q9H251 3354 aa13.67□□□□□ -0.22
CPNE3-205ENST00000522240 SPTBN5Q9NRC6 3674 aaKnown RBP13.67□□□□□ -0.22
CPNE3-205ENST00000522240 CCDC66A2RUB6 948 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 YJEFN3A6XGL0 299 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 TMEM110-MUSTN1A8MSY1 372 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 E7ENQ6 273 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 PSTPIP1O43586 416 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 GRAP2O75791 330 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 ATP1A1P05023 1023 aaKnown RBP13.66□□□□□ -0.22
CPNE3-205ENST00000522240 COMTP21964 271 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 CTNNA2P26232 953 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 HOXA9P31269 272 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 CTNNA1P35221 906 aaKnown RBP13.66□□□□□ -0.22
CPNE3-205ENST00000522240 IRS1P35568 1242 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 CLCN4P51793 760 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 RNASE9P60153 205 aaKnown RBP13.66□□□□□ -0.22
CPNE3-205ENST00000522240 TAF5Q15542 800 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 DNTTIP2Q5QJE6 756 aaKnown RBP13.66□□□□□ -0.22
CPNE3-205ENST00000522240 PAPD7Q5XG87 772 aaKnown RBP13.66□□□□□ -0.22
CPNE3-205ENST00000522240 STRADAQ7RTN6 431 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 ITIH5Q86UX2 942 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 PDZD8Q8NEN9 1154 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 GDPD5Q8WTR4 605 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 ARNTL2Q8WYA1 636 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 FBXO32Q969P5 355 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 HES6Q96HZ4 224 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 MYRFLQ96LU7 910 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 CDX2Q99626 313 aaPredicted RBP13.66□□□□□ -0.22
CPNE3-205ENST00000522240 TLR10Q9BXR5 811 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 RRAGDQ9NQL2 400 aaPredicted RBP13.66□□□□□ -0.22
CPNE3-205ENST00000522240 ABCC13Q9NSE7 274 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 TMEM51Q9NW97 253 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 HYOU1Q9Y4L1 999 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 ASB3Q9Y575 518 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 NCOR1O75376 2440 aa13.66□□□□□ -0.22
CPNE3-205ENST00000522240 ZNF638Q14966 1978 aaKnown RBP13.65□□□□□ -0.22
CPNE3-205ENST00000522240 MTCL1Q9Y4B5 1905 aaKnown RBP13.65□□□□□ -0.22
CPNE3-205ENST00000522240 LRCH4O75427 683 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 RNF8O76064 485 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 C8AP07357 584 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 PRLRP16471 622 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 PCK1P35558 622 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 EPHB3P54753 998 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 YWHAGP61981 247 aaKnown RBP eCLIP13.65□□□□□ -0.22
CPNE3-205ENST00000522240 USP46P62068 366 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 AMPD2Q01433 879 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 TWF1Q12792 350 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 IFRD2Q12894 506 aaPredicted RBP13.65□□□□□ -0.22
CPNE3-205ENST00000522240 TUBB2AQ13885 445 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 RPS6KA1Q15418 735 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 SLC25A52Q3SY17 297 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 CCDC14Q49A88 953 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 LRRC38Q5VT99 294 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 ELMSAN1Q6PJG2 1045 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 HFE2Q6ZVN8 426 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 BNIPLQ7Z465 357 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 MON1AQ86VX9 555 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 DEFB106AQ8N104 65 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 KREMEN2Q8NCW0 462 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 SLC7A14Q8TBB6 771 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 MICAL1Q8TDZ2 1067 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 ZNF592Q92610 1267 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 CENPIQ92674 756 aaPredicted RBP13.65□□□□□ -0.22
CPNE3-205ENST00000522240 NT5C3BQ969T7 300 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 PSMG2Q969U7 264 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 SLITRK1Q96PX8 696 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 NPY6RQ99463 290 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 TUBB2BQ9BVA1 445 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 PLEKHA4Q9H4M7 779 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 TLR8Q9NR97 1041 aaKnown RBP13.65□□□□□ -0.22
CPNE3-205ENST00000522240 CLIC5Q9NZA1 410 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 UXTQ9UBK9 157 aaPredicted RBP13.65□□□□□ -0.22
CPNE3-205ENST00000522240 DPP7Q9UHL4 492 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 SNX12Q9UMY4 172 aa13.65□□□□□ -0.22
CPNE3-205ENST00000522240 CES2O00748 559 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 ENC1O14682 589 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 CAPN9O14815 690 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 GPR37O15354 613 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 DDX3YO15523 660 aaKnown RBP13.64□□□□□ -0.23
CPNE3-205ENST00000522240 CLASP2O75122 1294 aaKnown RBP13.64□□□□□ -0.23
CPNE3-205ENST00000522240 LRG1P02750 347 aa13.64□□□□□ -0.23
CPNE3-205ENST00000522240 POU2F2P09086 479 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms