RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 CCL26Q9Y258 94 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 TECTAO75443 2155 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 XIRP2A4UGR9 3374 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 BDP1A6H8Y1 2624 aa9.94□□□□□ -0.82
CLK4-209ENST00000521621 CYP26A1O43174 497 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 GABBR2O75899 941 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 RARGP13631 454 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 CD19P15391 556 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 EIF4EBP2Q13542 120 aaPredicted RBP9.93□□□□□ -0.82
CLK4-209ENST00000521621 TRIP4Q15650 581 aaPredicted RBP9.93□□□□□ -0.82
CLK4-209ENST00000521621 CC2D1AQ6P1N0 951 aaPredicted RBP9.93□□□□□ -0.82
CLK4-209ENST00000521621 C1orf131Q8NDD1 294 aaKnown RBP9.93□□□□□ -0.82
CLK4-209ENST00000521621 RIN3Q8TB24 985 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 NELL1Q92832 810 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 NMUR1Q9HB89 426 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 FBXO4Q9UKT5 387 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 HCN4Q9Y3Q4 1203 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 CPQQ9Y646 472 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 A0A1W2PQH9 124 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 CHURC1-FNTBB4DL54 471 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 FOXN3O00409 490 aaPredicted RBP9.93□□□□□ -0.82
CLK4-209ENST00000521621 GFRA2O00451 464 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 BRD2P25440 801 aaKnown RBP9.93□□□□□ -0.82
CLK4-209ENST00000521621 ZXDBP98169 803 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 GRM2Q14416 872 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 DRAP1Q14919 205 aaPredicted RBP9.93□□□□□ -0.82
CLK4-209ENST00000521621 NR1I3Q14994 352 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 HSF5Q4G112 596 aaPredicted RBP9.93□□□□□ -0.82
CLK4-209ENST00000521621 TMEM196Q5HYL7 178 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 ACBD5Q5T8D3 534 aaPredicted RBP9.93□□□□□ -0.82
CLK4-209ENST00000521621 PMF1Q6P1K2 205 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 CRACR2AQ9BSW2 395 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 LSM14BQ9BX40 385 aaKnown RBP9.93□□□□□ -0.82
CLK4-209ENST00000521621 GKN1Q9NS71 199 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 DUS2Q9NX74 493 aaKnown RBP9.93□□□□□ -0.82
CLK4-209ENST00000521621 RRN3Q9NYV6 651 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 AJAP1Q9UKB5 411 aaPredicted RBP9.93□□□□□ -0.82
CLK4-209ENST00000521621 SIT1Q9Y3P8 196 aa9.93□□□□□ -0.82
CLK4-209ENST00000521621 A0A1W2PQJ5 194 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.92□□□□□ -0.82
CLK4-209ENST00000521621 SPECC1L-ADORA2AF8WAN1 911 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 M0QYV0 167 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 CCDC172P0C7W6 258 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 C7P10643 843 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 MBL2P11226 248 aaPredicted RBP9.92□□□□□ -0.82
CLK4-209ENST00000521621 KRT5P13647 590 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 DRD1P21728 446 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 SOX5P35711 763 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 IFNAR2P48551 515 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 PTPN5P54829 565 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 FBXO43Q4G163 708 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 FILIP1LQ4L180 1135 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 ADGRG2Q8IZP9 1017 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 SIX6OS1Q8N1H7 587 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 TMEM105Q8N8V8 129 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 DTWD2Q8NBA8 298 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 NOX5Q96PH1 765 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 ULBP1Q9BZM6 244 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 CHRDQ9H2X0 955 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 CCSER2Q9H7U1 834 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 ECT2Q9H8V3 914 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 TRPC7Q9HCX4 862 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.92□□□□□ -0.82
CLK4-209ENST00000521621 PRMT8Q9NR22 394 aaPredicted RBP9.92□□□□□ -0.82
CLK4-209ENST00000521621 FHOD1Q9Y613 1164 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 PIAS3Q9Y6X2 628 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 IGLV3-25P01717 112 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 CYP11B1P15538 503 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 CTHP32929 405 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 PBX1P40424 430 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 STAT1P42224 750 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 E2F5Q15329 346 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 GAB4Q2WGN9 574 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 GJB7Q6PEY0 223 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 TPRG1Q6ZUI0 275 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 WDTC1Q8N5D0 677 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 FAM3CQ92520 227 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 CHFRQ96EP1 664 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 SLC2A13Q96QE2 648 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 CYP2S1Q96SQ9 504 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 NUP58Q9BVL2 599 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 FAM126AQ9BYI3 521 aaPredicted RBP9.92□□□□□ -0.82
CLK4-209ENST00000521621 VPS16Q9H269 839 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 MFSD1Q9H3U5 465 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 CHORDC1Q9UHD1 332 aaPredicted RBP9.92□□□□□ -0.82
CLK4-209ENST00000521621 NOCTQ9UK39 431 aaKnown RBP9.92□□□□□ -0.82
CLK4-209ENST00000521621 MYH10P35580 1976 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 UNC80Q8N2C7 3258 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 THAP12O43422 761 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 CYP1A1P04798 512 aaPredicted RBP9.92□□□□□ -0.82
CLK4-209ENST00000521621 CDK11BP21127 795 aaKnown RBP9.92□□□□□ -0.82
CLK4-209ENST00000521621 ADIGQ0VDE8 80 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 PDCLQ13371 301 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 CCINQ13939 588 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 EFHC1Q5JVL4 640 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 DENND1BQ6P3S1 775 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 NEK11Q8NG66 645 aa9.92□□□□□ -0.82
CLK4-209ENST00000521621 SYN2Q92777 582 aaPredicted RBP9.92□□□□□ -0.82
CLK4-209ENST00000521621 NUCKS1Q9H1E3 243 aaKnown RBP9.92□□□□□ -0.82
CLK4-209ENST00000521621 CBX8Q9HC52 389 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms