RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CRKLP46109 303 aaKnown RBP3.9□□□□□ -1.79
VPS13B-209ENST00000521559 TOB1P50616 345 aaPredicted RBP3.9□□□□□ -1.79
VPS13B-209ENST00000521559 SRSF4Q08170 494 aaKnown RBP3.9□□□□□ -1.79
VPS13B-209ENST00000521559 PIN1Q13526 163 aaPredicted RBP3.9□□□□□ -1.79
VPS13B-209ENST00000521559 GTF2H3Q13889 308 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 E2F2Q14209 437 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 TTF1Q15361 905 aaPredicted RBP3.9□□□□□ -1.79
VPS13B-209ENST00000521559 SLC15A2Q16348 729 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 KRT24Q2M2I5 525 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 PLEKHG6Q3KR16 790 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 AARS2Q5JTZ9 985 aaKnown RBP3.9□□□□□ -1.79
VPS13B-209ENST00000521559 ODR4Q5SWX8 454 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 VPS53Q5VIR6 699 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 AMIGO2Q86SJ2 522 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 DAAM2Q86T65 1068 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 TSPYL6Q8N831 410 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 PCSK9Q8NBP7 692 aaKnown RBP3.9□□□□□ -1.79
VPS13B-209ENST00000521559 STK32BQ9NY57 414 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 ZNF180Q9UJW8 692 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 PCDHA6Q9UN73 950 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 TMX2Q9Y320 296 aa3.9□□□□□ -1.79
VPS13B-209ENST00000521559 A0A088AWK7 358 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 H3BML4 177 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 PPM1DO15297 605 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 AP1G1O43747 822 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 DNAJB5O75953 348 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 UNC5CO95185 931 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 ALDH2P05091 517 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 HNRNPCP07910 306 aaKnown RBP eCLIP3.89□□□□□ -1.79
VPS13B-209ENST00000521559 EIF2S2P20042 333 aaKnown RBP3.89□□□□□ -1.79
VPS13B-209ENST00000521559 IL6STP40189 918 aaPredicted RBP3.89□□□□□ -1.79
VPS13B-209ENST00000521559 EPHB1P54762 984 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 EIF5P55010 431 aaKnown RBP3.89□□□□□ -1.79
VPS13B-209ENST00000521559 FOXF2Q12947 444 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 EIF2B5Q13144 721 aaKnown RBP3.89□□□□□ -1.79
VPS13B-209ENST00000521559 GRM1Q13255 1194 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 LLGL1Q15334 1064 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 TWISTNBQ3B726 338 aaPredicted RBP3.89□□□□□ -1.79
VPS13B-209ENST00000521559 CCDC30Q5VVM6 783 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 SLC29A4Q7RTT9 530 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 DENND1CQ8IV53 801 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 SEMA6DQ8NFY4 1073 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 DIS3LQ8TF46 1054 aaKnown RBP3.89□□□□□ -1.79
VPS13B-209ENST00000521559 GLOD4Q9HC38 313 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 DDX21Q9NR30 783 aaKnown RBP eCLIP3.89□□□□□ -1.79
VPS13B-209ENST00000521559 MRPS18AQ9NVS2 196 aaKnown RBP3.89□□□□□ -1.79
VPS13B-209ENST00000521559 ZSCAN32Q9NX65 697 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 TFCP2L1Q9NZI6 479 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 CPA4Q9UI42 421 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 MED16Q9Y2X0 877 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 PAXBP1Q9Y5B6 917 aa3.89□□□□□ -1.79
VPS13B-209ENST00000521559 ADAMTS7Q9UKP4 1686 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 MANSC4A6NHS7 340 aaPredicted RBP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 TARM1B6A8C7 271 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 INO80B-WBP1J3KQ70 363 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 RFPL1O75677 317 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 RFC4P35249 363 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 PIP4K2AP48426 406 aaPredicted RBP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 ZNF134P52741 427 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 WNT3P56703 355 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 EEFSECP57772 596 aaKnown RBP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 PROK1P58294 105 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 GPSM2P81274 684 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 MCL1Q07820 350 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 BOP1Q14137 746 aaKnown RBP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 TBC1D25Q3MII6 688 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 ARHGAP40Q5TG30 622 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 MTHFD1LQ6UB35 978 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 SMIM5Q71RC9 77 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 PARS2Q7L3T8 475 aaKnown RBP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 COL23A1Q86Y22 540 aaPredicted RBP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 FANCBQ8NB91 859 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 RP9Q8TA86 221 aaKnown RBP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 JPH3Q8WXH2 748 aaPredicted RBP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 STK31Q9BXU1 1019 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 RHOBTB2Q9BYZ6 727 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 INO80BQ9C086 356 aaPredicted RBP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 SEMA4CQ9C0C4 833 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 ARMT1Q9H993 441 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 HYPKQ9NX55 129 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 FLRT1Q9NZU1 646 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 CHPF2Q9P2E5 772 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 XPR1Q9UBH6 696 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 DKK3Q9UBP4 350 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 DBF4Q9UBU7 674 aaPredicted RBP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 ADAM21Q9UKJ8 722 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 G3BP2Q9UN86 482 aaKnown RBP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 ZBTB1Q9Y2K1 713 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.88□□□□□ -1.79
VPS13B-209ENST00000521559 KCPQ6ZWJ8 1503 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 AOX1Q06278 1338 aa3.88□□□□□ -1.79
VPS13B-209ENST00000521559 NHSQ6T4R5 1651 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 SHANK3Q9BYB0 1731 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 BRWD3Q6RI45 1802 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 WNK3Q9BYP7 1800 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 A0A1W2PPL8 197 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 LINC01548A6NM66 108 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 ERVV-1B6SEH8 477 aa3.87□□□□□ -1.79
VPS13B-209ENST00000521559 TCERG1O14776 1098 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms