RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 RIT2Q99578 217 aa7.84□□□□□ -1.15
CTNNA1-227ENST00000521387 BPIFA3Q9BQP9 254 aa7.84□□□□□ -1.15
CTNNA1-227ENST00000521387 LZTS2Q9BRK4 669 aa7.84□□□□□ -1.15
CTNNA1-227ENST00000521387 PDZD7Q9H5P4 517 aa7.84□□□□□ -1.15
CTNNA1-227ENST00000521387 FAM13BQ9NYF5 915 aa7.84□□□□□ -1.15
CTNNA1-227ENST00000521387 EIF2B4Q9UI10 523 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-227ENST00000521387 SDK2Q58EX2 2172 aa7.84□□□□□ -1.15
CTNNA1-227ENST00000521387 HIVEP3Q5T1R4 2406 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 ANK1P16157 1881 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 ZNF638Q14966 1978 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 RP1L1Q8IWN7 2480 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 A0A087X0B3 334 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 SMIM28A0A1B0GU29 152 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 E2F8A0AVK6 867 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 A1L4Q6 167 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 SMCO2A6NFE2 343 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 MEI4A8MW99 385 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 GOLGA6L6A8MZA4 724 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 KCNJ18B7U540 433 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 ZBTB39O15060 712 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 POLR2DO15514 142 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 ACTN4O43707 911 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 MARCH6O60337 910 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 TADA3O75528 432 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 OAZ2O95190 189 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 MT-CO3P00414 261 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 HMGA1P17096 107 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 CD6P30203 668 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 TNFSF9P41273 254 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 AFMP43652 599 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 LSSP48449 732 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 GNAQP50148 359 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 CCT8P50990 548 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 ADCY7P51828 1080 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 GABREP78334 506 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 SRSF6Q13247 344 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 CLN3Q13286 438 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 CLCA4Q14CN2 919 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 EMC2Q15006 297 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 ZC2HC1CQ53FD0 456 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 TTC38Q5R3I4 469 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 PRAMEF14Q5SWL7 426 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 EEF1DP3Q658K8 133 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 MON1AQ86VX9 555 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 BLIDQ8IZY5 108 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 SPATA20Q8TB22 786 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 GIPC2Q8TF65 315 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 IGSF8Q969P0 613 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 TOE1Q96GM8 510 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 CEP170P1Q96L14 293 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 MRGPRX1Q96LB2 322 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 ZMAT2Q96NC0 199 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 CYP2S1Q96SQ9 504 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 ACOX2Q99424 681 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 GPR174Q9BXC1 333 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 NAT10Q9H0A0 1025 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 SLC25A18Q9H1K4 315 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 BRMS1Q9HCU9 246 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 SH3GLB2Q9NR46 395 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 MAN1B1Q9UKM7 699 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 ANKRD6Q9Y2G4 727 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 GDAQ9Y2T3 454 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 PCDHA5Q9Y5H7 936 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 TIMM13Q9Y5L4 95 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 MYOFQ9NZM1 2061 aa7.83□□□□□ -1.16
CTNNA1-227ENST00000521387 SMTNL1A8MU46 457 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 EML1O00423 815 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 WIPF1O43516 503 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 GAS7O60861 476 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 CYP17A1P05093 508 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 HOXB2P14652 356 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 BMP6P22004 513 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 GLRA2P23416 452 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 ARL2P36404 184 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 RFC5P40937 340 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 CASRP41180 1078 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 CTSKP43235 329 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 TNFRSF4P43489 277 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 NAPAP54920 295 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 ATP2C1P98194 919 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 LRMPQ12912 555 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 NR1H3Q13133 447 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 NOLC1Q14978 699 aaKnown RBP eCLIP7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 ZRSR1Q15695 479 aaKnown RBP7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 IL17AQ16552 155 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 XKR4Q5GH76 650 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 LRCH2Q5VUJ6 765 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 ALKAL1Q6UXT8 129 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 PIK3AP1Q6ZUJ8 805 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 ITIH5Q86UX2 942 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 TEX2Q8IWB9 1127 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 GRAMD1CQ8IYS0 662 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 C4orf32Q8N8J7 132 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 CADM4Q8NFZ8 388 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 RDM1Q8NG50 284 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 ZNF564Q8TBZ8 553 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 KIAA1524Q8TCG1 905 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 IPO4Q8TEX9 1081 aaKnown RBP7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 MIB2Q96AX9 1013 aa7.82□□□□□ -1.16
CTNNA1-227ENST00000521387 MRFAP1L1Q96HT8 127 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms