RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 KCND3Q9UK17 655 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 RCE1Q9Y256 329 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 ZBTB1Q9Y2K1 713 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 MAP3K2Q9Y2U5 619 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 RPS6KL1Q9Y6S9 549 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 SCINQ9Y6U3 715 aa3.96□□□□□ -1.78
HMGN1P28-201ENST00000521340 KAT6BQ8WYB5 2073 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 GAGE12BA1L429 117 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 GAGE12HA6NDE8 117 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 TMEM200CA6NKL6 621 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 SLC38A8A6NNN8 435 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 E7EVH7 732 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 F5H697 171 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 M0QYT0 321 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 PPM1DO15297 605 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 ZSCAN9O15535 394 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 PROM1O43490 865 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 CCNT2O60583 730 aaKnown RBP3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 LPXNO60711 386 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 PPP6R2O75170 966 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 NCR1O76036 304 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 RECQL4O94761 1208 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 HLA-DOAP06340 250 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 TNFRSF1AP19438 455 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 RBL1P28749 1068 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 PCSK6P29122 969 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 CD6P30203 668 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 BMPR1AP36894 532 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 PDE6CP51160 858 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 TAF12Q16514 161 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 ADCK5Q3MIX3 580 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 RINT1Q6NUQ1 792 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 FAM180BQ6P0A1 224 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 C16orf54Q6UWD8 224 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 LAYNQ6UX15 382 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 RAB11FIP2Q7L804 512 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 MAATS1Q7Z4T9 603 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 C2CD5Q86YS7 1000 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 TMPRSS6Q8IU80 811 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 SPARTQ8N0X7 666 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 GALNT4Q8N4A0 578 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 SMCR8Q8TEV9 937 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 AFG1LQ8WV93 481 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 SOCS4Q8WXH5 440 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 LPIN2Q92539 896 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 TRIM63Q969Q1 353 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 FAM136AQ96C01 138 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 RSPRY1Q96DX4 576 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 SEC62Q99442 399 aaKnown RBP3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 REEP2Q9BRK0 252 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 TTPALQ9BTX7 342 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 HERC2P3Q9BVR0 1158 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 REXO4Q9GZR2 422 aaKnown RBP3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 UNC45AQ9H3U1 944 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 ZNF703Q9H7S9 590 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 AKIP1Q9NQ31 210 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 SMPD4Q9NXE4 827 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 NRBP1Q9UHY1 535 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 GABRQQ9UN88 632 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 DNAJC16Q9Y2G8 782 aa3.95□□□□□ -1.78
HMGN1P28-201ENST00000521340 KIF28PB7ZC32 967 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 TOR1BO14657 336 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 MATN3O15232 486 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 SPRY2O43597 315 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 RGS10O43665 173 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 MBD4O95243 580 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 TFRCP02786 760 aaKnown RBP3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 EPHA3P29320 983 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 HIBADHP31937 336 aaKnown RBP3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 MCM5P33992 734 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 PRKAG1P54619 331 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 FOXL2P58012 376 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 UBE3AQ05086 875 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 FPGSQ05932 587 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 CYP1B1Q16678 543 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 PRICKLE4Q2TBC4 344 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 TMEM196Q5HYL7 178 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 ATPAF1Q5TC12 328 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 CLEC9AQ6UXN8 241 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 RHOUQ7L0Q8 258 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 TSPYL6Q8N831 410 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 SUPT20HQ8NEM7 779 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 SLC22A17Q8WUG5 538 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 SNX19Q92543 992 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 TMEM125Q96AQ2 219 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 KTI12Q96EK9 354 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 RRP36Q96EU6 259 aaKnown RBP3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 PRR11Q96HE9 360 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 NPAS1Q99742 590 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 PHF7Q9BWX1 381 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 INO80BQ9C086 356 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 NRDE2Q9H7Z3 1164 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 IL21RQ9HBE5 538 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 GALNT9Q9HCQ5 603 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 TRIM36Q9NQ86 728 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 INTS13Q9NVM9 706 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 TRPM5Q9NZQ8 1165 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 USP22Q9UPT9 525 aa3.94□□□□□ -1.78
HMGN1P28-201ENST00000521340 DRG1Q9Y295 367 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms