RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 DNAJC17Q9NVM6 304 aaKnown RBP17.01■□□□□ 0.31
IGHV3-42-201ENST00000520410 DEC1Q9P2X7 70 aa17.01■□□□□ 0.31
IGHV3-42-201ENST00000520410 MMP17Q9ULZ9 603 aa17.01■□□□□ 0.31
IGHV3-42-201ENST00000520410 SCML2Q9UQR0 700 aa17.01■□□□□ 0.31
IGHV3-42-201ENST00000520410 CFAP54Q96N23 3096 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 PSMA7O14818 248 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 SLC16A3O15427 465 aaKnown RBP17■□□□□ 0.31
IGHV3-42-201ENST00000520410 GDF9O60383 454 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 EPN2O95208 641 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 ZDHHC11BP0C7U3 371 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 MPLP40238 635 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 EIF2DP41214 584 aaKnown RBP17■□□□□ 0.31
IGHV3-42-201ENST00000520410 MRPS21P82921 87 aaKnown RBP17■□□□□ 0.31
IGHV3-42-201ENST00000520410 FKBP3Q00688 224 aaKnown RBP17■□□□□ 0.31
IGHV3-42-201ENST00000520410 ENPEPQ07075 957 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 GAB4Q2WGN9 574 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 EOGTQ5NDL2 527 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 EMC10Q5UCC4 262 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 RIF1Q5UIP0 2472 aaKnown RBP17■□□□□ 0.31
IGHV3-42-201ENST00000520410 ANKRD40Q6AI12 368 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 GRAMD4Q6IC98 578 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 TMEM25Q86YD3 366 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 KIAA1958Q8N8K9 716 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 WHAMMQ8TF30 809 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 TATDN2Q93075 761 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 ERLEC1Q96DZ1 483 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 XPO6Q96QU8 1125 aaKnown RBP17■□□□□ 0.31
IGHV3-42-201ENST00000520410 DUSP16Q9BY84 665 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 NMUR1Q9HB89 426 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 IL37Q9NZH6 218 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 ARMCX3Q9UH62 379 aaPredicted RBP17■□□□□ 0.31
IGHV3-42-201ENST00000520410 DNMT3LQ9UJW3 386 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 MYH10P35580 1976 aa17■□□□□ 0.31
IGHV3-42-201ENST00000520410 DMDP11532 3685 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 TCRBV21S2A2A0A5A6 115 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 FAM92AA1XBS5 289 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 MAP3K13O43283 966 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 FOXD2O60548 495 aaPredicted RBP16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 TULP3O75386 442 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 TGM1P22735 817 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 WASP42768 502 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 YWHAEP62258 255 aaKnown RBP16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 MESP2Q0VG99 397 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 EFEMP1Q12805 493 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 CRY1Q16526 586 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 GOLGA7BQ2TAP0 167 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 PLK5Q496M5 336 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 CBWD6Q4V339 395 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 CBWD3Q5JTY5 395 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 CBWD5Q5RIA9 395 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 ZNF513Q8N8E2 541 aaPredicted RBP16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 HMGB4Q8WW32 186 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 LOXL4Q96JB6 756 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 SPACA7Q96KW9 195 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 PNPLA8Q9NP80 782 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 OSER1Q9NX31 292 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 HESX1Q9UBX0 185 aa16.99■□□□□ 0.31
IGHV3-42-201ENST00000520410 ATG2BQ96BY7 2078 aa16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 HHLA1C9JL84 531 aa16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 SGK1O00141 431 aa16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 ZBTB24O43167 697 aaPredicted RBP16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 DHPSP49366 369 aaPredicted RBP16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 PSEN1P49768 467 aa16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 PMS1P54277 932 aaKnown RBP16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 LRRC63Q05C16 580 aa16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 ARMCX6Q7L4S7 300 aa16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 TRMT11Q7Z4G4 463 aaKnown RBP16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 IL17RCQ8NAC3 791 aa16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 SLC4A11Q8NBS3 891 aa16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 MDGA1Q8NFP4 955 aa16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 KLF16Q9BXK1 252 aaPredicted RBP16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 GTPBP4Q9BZE4 634 aaKnown RBP16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 CYLDQ9NQC7 956 aa16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 EBF1Q9UH73 591 aa16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 CTNND2Q9UQB3 1225 aa16.98■□□□□ 0.31
IGHV3-42-201ENST00000520410 BIN1O00499 593 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 HOXC11O43248 304 aaPredicted RBP16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 TYRP14679 529 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 TNFRSF4P43489 277 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 PLA2G4AP47712 749 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 KIF11P52732 1056 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 RAD23BP54727 409 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 CUL2Q13617 745 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 SGO2Q562F6 1265 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 SDE2Q6IQ49 451 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 TMEM92Q6UXU6 159 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 ARHGAP18Q8N392 663 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 TERB1Q8NA31 727 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 RLN3Q8WXF3 142 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 CNOT6LQ96LI5 555 aaKnown RBP16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 CDK5RAP1Q96SZ6 601 aaKnown RBP16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 DUSP15Q9H1R2 295 aaPredicted RBP16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 LRRC4Q9HBW1 653 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 PLK2Q9NYY3 685 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 STRIP2Q9ULQ0 834 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 GVINP1Q7Z2Y8 2422 aa16.97■□□□□ 0.31
IGHV3-42-201ENST00000520410 KIAA1549LQ6ZVL6 1849 aa16.96■□□□□ 0.31
IGHV3-42-201ENST00000520410 EP300Q09472 2414 aaPredicted RBP16.96■□□□□ 0.31
IGHV3-42-201ENST00000520410 SLC30A4O14863 429 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms