RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 CPA6Q8N4T0 437 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 C1orf131Q8NDD1 294 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 ZSWIM2Q8NEG5 633 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 SHC3Q92529 594 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 FGF13Q92913 245 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 ATP2A3Q93084 1043 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 NELL2Q99435 816 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 CRACR2AQ9BSW2 395 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 IER2Q9BTL4 223 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 TRMT61BQ9BVS5 477 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 TTLL2Q9BWV7 592 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 APOL5Q9BWW9 433 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 S1PR5Q9H228 398 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 EPC1Q9H2F5 836 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 DEF6Q9H4E7 631 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 POMKQ9H5K3 350 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 BRD9Q9H8M2 597 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 CSNK1G1Q9HCP0 422 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 TRPC7Q9HCX4 862 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 ABCC13Q9NSE7 274 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 FAM207AQ9NSI2 230 aaPredicted RBP5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 SAMSN1Q9NSI8 373 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 FAM49BQ9NUQ9 324 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 DONSONQ9NYP3 566 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 CLIC5Q9NZA1 410 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 WDR35Q9P2L0 1181 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 TSPAN16Q9UKR8 245 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 STAP1Q9ULZ2 295 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 SCML2Q9UQR0 700 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 LUC7L2Q9Y383 392 aaKnown RBP5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 SH3BP1Q9Y3L3 701 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 PCDHGC5Q9Y5F6 944 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 ADGRG1Q9Y653 693 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 ANK1P16157 1881 aa5.92□□□□□ -1.46
CTNNA1-220ENST00000520260 TRANK1O15050 2925 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 A0A1B0GTH6 734 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 A0A1W2PQJ5 194 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 A0A1W2PRU2 124 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 LOC730098B7Z3J9 87 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 AKR1B15C9JRZ8 316 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 F8VZ95 297 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 SHOX2O60902 331 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 LRRN2O75325 713 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 GFPT2O94808 682 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 ZBED1O96006 694 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 ADH1CP00326 375 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 APOEP02649 317 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 CALB1P05937 261 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 GLI1P08151 1106 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 MYBL1P10243 752 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 MBL2P11226 248 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 SRFP11831 508 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 PSMC3P17980 439 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 HDCP19113 662 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 ACO1P21399 889 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 LMO2P25791 158 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 SOX5P35711 763 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 LTBRP36941 435 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 SCNN1AP37088 669 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 PBX1P40424 430 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 RAP1GAPP47736 663 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 HARS2P49590 506 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 RAD23BP54727 409 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 GYS2P54840 703 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 MLLT6P55198 1093 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 CDH8P55286 799 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 WNT7BP56706 349 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 POLR2FP61218 127 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 TFF2Q03403 129 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 PRKCQQ04759 706 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 IFRD2Q12894 506 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 LRRC32Q14392 662 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 CASP8Q14790 479 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 NR1I3Q14994 352 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 ASIC2Q16515 512 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 DDR2Q16832 855 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 HSP90AA4PQ58FG1 418 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 DNAJC21Q5F1R6 531 aaKnown RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 C1orf220Q5T0J3 134 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 KLHDC7AQ5VTJ3 777 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 SFMBT2Q5VUG0 894 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 NUGGCQ68CJ6 796 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 RRAGAQ7L523 313 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 CCDC91Q7Z6B0 441 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 UNC45BQ8IWX7 931 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 C12orf76Q8N812 135 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 SLC4A11Q8NBS3 891 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 ZSCAN18Q8TBC5 510 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 PLEKHO2Q8TD55 490 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 BPIFB1Q8TDL5 484 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 GIPC2Q8TF65 315 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 KCTD13Q8WZ19 329 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 SYN2Q92777 582 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 SEMA4DQ92854 862 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 ZNF707Q96C28 371 aaPredicted RBP5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 SERPINB11Q96P15 392 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 PNKPQ96T60 521 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 B3GNT5Q9BYG0 378 aa5.91□□□□□ -1.46
CTNNA1-220ENST00000520260 CXCL16Q9H2A7 254 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms