RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 PODXLO00592 558 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 PEX14O75381 377 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 PMPCBO75439 489 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 ELFN1P0C7U0 828 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 DRD4P21917 467 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 MST1P26927 711 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 TNFAIP2Q03169 654 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 NSUN2Q08J23 767 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 GPS1Q13098 491 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 ATP1A4Q13733 1029 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 STARD3Q14849 445 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 KRT72Q14CN4 511 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 AKNAD1Q5T1N1 836 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 PGBD2Q6P3X8 592 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 TLDC1Q6P9B6 456 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 CLEC9AQ6UXN8 241 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 MYLK4Q86YV6 388 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 SFTPA1Q8IWL2 248 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 PCDHAC1Q9H158 963 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 TMEM8AQ9HCN3 771 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 SNX15Q9NRS6 342 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 TAGLN3Q9UI15 199 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 AMFRQ9UKV5 643 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 RIMKLBQ9ULI2 386 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 ADAMTS5Q9UNA0 930 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 ST3GAL5Q9UNP4 418 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 SLC27A6Q9Y2P4 619 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 BICRAQ9NZM4 1560 aa3.87□□□□□ -1.79
HMGB1P41-201ENST00000520234 ATAD2BQ9ULI0 1458 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 GOLGA6L3A6NEY3 463 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 H0YIZ8 118 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 AGPSO00116 658 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 MASP2O00187 686 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 MGST3O14880 152 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 FFAR2O15552 330 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 TMPRSS11DO60235 418 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 PROP1O75360 226 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 VNN1O95497 513 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 GLP2RO95838 553 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 LDHAP00338 332 aaKnown RBP3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 VIPP01282 170 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 CREB1P16220 341 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 ENGP17813 658 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 GPD1P21695 349 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 ITPKBP27987 946 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 IL6STP40189 918 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 ELLP55199 621 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 C21orf58P58505 322 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 E2F1Q01094 437 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 RAB30Q15771 203 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 CYP1B1Q16678 543 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 PCID2Q5JVF3 399 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 TSTD2Q5T7W7 516 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 STRIP1Q5VSL9 837 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 RAP1GAP2Q684P5 730 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 ABLIM2Q6H8Q1 611 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 CEP85Q6P2H3 762 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 PTCHD4Q6ZW05 846 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 USP49Q70CQ1 688 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 SLC29A4Q7RTT9 530 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 RASAL3Q86YV0 1011 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 FSTL5Q8N475 847 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 ENAHQ8N8S7 591 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 ZNF527Q8NB42 609 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 SUN3Q8TAQ9 357 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 UBE2Q2Q8WVN8 375 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 NELL1Q92832 810 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 PMM1Q92871 262 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 MUL1Q969V5 352 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 VPS50Q96JG6 964 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 BBC3Q96PG8 261 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 PRR25Q96S07 402 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 NUDT22Q9BRQ3 303 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 THAP7Q9BT49 309 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 HELLSQ9NRZ9 838 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 SEMA4GQ9NTN9 838 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 ZNHIT2Q9UHR6 403 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 CDC23Q9UJX2 597 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 MAGED2Q9UNF1 606 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 SOGA1O94964 1423 aa3.86□□□□□ -1.79
HMGB1P41-201ENST00000520234 A0A087WV62 115 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 AP4M1O00189 453 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 CES2O00748 559 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 JTBO76095 146 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 FGAP02671 866 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 TMEM225BP0DP42 221 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 ARP10275 920 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 CDK4P11802 303 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 NTSR1P30989 418 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 DGKQP52824 942 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 EIF4A1P60842 406 aaKnown RBP3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 CHAF1AQ13111 956 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 ACOX1Q15067 660 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 TRIM71Q2Q1W2 868 aaKnown RBP3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 L1TD1Q5T7N2 865 aaKnown RBP3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 TTC30AQ86WT1 665 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 METTL25Q8N6Q8 603 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 C11orf44Q8N8P7 122 aa3.85□□□□□ -1.79
HMGB1P41-201ENST00000520234 SARAFQ96BY9 339 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms