RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 ARMC3Q5W041 872 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 JADE1Q6IE81 842 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 FOXD4L3Q6VB84 417 aaPredicted RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 TRAPPC11Q7Z392 1133 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 THNSL1Q8IYQ7 743 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 C1orf127Q8N9H9 656 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 FBXL13Q8NEE6 735 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 ANKRD20A12PQ8NF67 263 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 MYCBPAPQ8TBZ2 947 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 RNF34Q969K3 372 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 PSMG2Q969U7 264 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 SLC35C1Q96A29 364 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 HDAC11Q96DB2 347 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 BICD1Q96G01 975 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 FNBP1Q96RU3 617 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 MYADMQ96S97 322 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 GAD1Q99259 594 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 NAA15Q9BXJ9 866 aaKnown RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 SRRTQ9BXP5 876 aaKnown RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 OSBPL2Q9H1P3 480 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 FBXO44Q9H4M3 255 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 C8orf33Q9H7E9 229 aaPredicted RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 FBRSQ9HAH7 460 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 MARK1Q9P0L2 795 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 PCDHB5Q9Y5E4 795 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 BZW2Q9Y6E2 419 aaKnown RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 USP3Q9Y6I4 520 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 F8P00451 2351 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 A0A1B0GVL5 298 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 KRBA1A5PL33 1030 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 MED7O43513 233 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 HUS1O60921 280 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 PPFIA3O75145 1194 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 CILPO75339 1184 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 TMEM191BP0C7N4 346 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 FOSL1P15407 271 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 PTPN2P17706 415 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 PTGS1P23219 599 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 RBMXP38159 391 aaKnown RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 MLH1P40692 756 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 PRKCIP41743 596 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 AFMP43652 599 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 PLA2G4AP47712 749 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 INHBCP55103 352 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 RACK1P63244 317 aaKnown RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 TPM4P67936 248 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 SKOR1P84550 965 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 PFKPQ01813 784 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 ADAM9Q13443 819 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 NAA30Q147X3 362 aaPredicted RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 CNGA2Q16280 664 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 C5orf22Q49AR2 442 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 VWA3BQ502W6 1294 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 ZNF394Q53GI3 561 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 PM20D1Q6GTS8 502 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 TMPRSS7Q7RTY8 843 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 CCDC186Q7Z3E2 898 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 KSR1Q8IVT5 923 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 RAVER1Q8IY67 606 aaKnown RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 EFCAB13Q8IY85 973 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 ELMOD1Q8N336 334 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 C1orf131Q8NDD1 294 aaKnown RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 PIP4K2CQ8TBX8 421 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 GJA10Q969M2 543 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 ALKBH8Q96BT7 664 aaKnown RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 PGAP3Q96FM1 320 aaPredicted RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 CPB2Q96IY4 423 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 SENP8Q96LD8 212 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 ZMAT2Q96NC0 199 aaKnown RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 FRMD6Q96NE9 622 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 CLSTN3Q9BQT9 956 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 IMPG2Q9BZV3 1241 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 ARMCX3Q9UH62 379 aaPredicted RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.01□□□□□ -1.93
MCF2-208ENST00000519895 PRKAB1Q9Y478 270 aa3.01□□□□□ -1.93
MCF2-208ENST00000519895 SMG1Q96Q15 3661 aaKnown RBP3□□□□□ -1.93
MCF2-208ENST00000519895 TRIP11Q15643 1979 aa3□□□□□ -1.93
MCF2-208ENST00000519895 CCDC163A0A0D9SF12 145 aa3□□□□□ -1.93
MCF2-208ENST00000519895 GRM6O15303 877 aa3□□□□□ -1.93
MCF2-208ENST00000519895 CBFA2T2O43439 604 aa3□□□□□ -1.93
MCF2-208ENST00000519895 EXOC3O60645 756 aa3□□□□□ -1.93
MCF2-208ENST00000519895 PRPF6O94906 941 aaKnown RBP3□□□□□ -1.93
MCF2-208ENST00000519895 VNN1O95497 513 aa3□□□□□ -1.93
MCF2-208ENST00000519895 CXCL14O95715 111 aa3□□□□□ -1.93
MCF2-208ENST00000519895 IBSPP21815 317 aaPredicted RBP3□□□□□ -1.93
MCF2-208ENST00000519895 NR2F2P24468 414 aa3□□□□□ -1.93
MCF2-208ENST00000519895 FMO5P49326 533 aa3□□□□□ -1.93
MCF2-208ENST00000519895 CASP5P51878 434 aa3□□□□□ -1.93
MCF2-208ENST00000519895 YWHAHQ04917 246 aaPredicted RBP3□□□□□ -1.93
MCF2-208ENST00000519895 RNASELQ05823 741 aaKnown RBP3□□□□□ -1.93
MCF2-208ENST00000519895 USP4Q13107 963 aa3□□□□□ -1.93
MCF2-208ENST00000519895 CBLBQ13191 982 aa3□□□□□ -1.93
MCF2-208ENST00000519895 ZNF667Q5HYK9 610 aa3□□□□□ -1.93
MCF2-208ENST00000519895 LCLAT1Q6UWP7 414 aa3□□□□□ -1.93
MCF2-208ENST00000519895 BNIPLQ7Z465 357 aa3□□□□□ -1.93
MCF2-208ENST00000519895 C11orf74Q86VG3 221 aa3□□□□□ -1.93
MCF2-208ENST00000519895 PSTKQ8IV42 348 aaKnown RBP3□□□□□ -1.93
MCF2-208ENST00000519895 VPS52Q8N1B4 723 aa3□□□□□ -1.93
MCF2-208ENST00000519895 RDH13Q8NBN7 331 aa3□□□□□ -1.93
MCF2-208ENST00000519895 NELFBQ8WX92 580 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms