RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 GAD2Q05329 585 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 PPP3CAQ08209 521 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 EDRF1Q3B7T1 1238 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 KBTBD6Q86V97 674 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 C12orf29Q8N999 325 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 CCDC150Q8NCX0 1101 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 FAXDC2Q96IV6 333 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 HNRNPABQ99729 332 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 NT5C1AQ9BXI3 368 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 ARRDC1-AS1Q9H2J1 176 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 CCSER2Q9H7U1 834 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 PNPLA8Q9NP80 782 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 TLR8Q9NR97 1041 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 FAM49BQ9NUQ9 324 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 POLR3BQ9NW08 1133 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 HMGXB4Q9UGU5 601 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 MMP17Q9ULZ9 603 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 MAPK8IP1Q9UQF2 711 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 SH3BP1Q9Y3L3 701 aa13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAPPC9-206ENST00000519482 MYO18AQ92614 2054 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 SPTBN2O15020 2390 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 PLXND1Q9Y4D7 1925 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 BEST1O76090 585 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 RHOBTB1O94844 696 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 KAT7O95251 611 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 APODP05090 189 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 GTF2H1P32780 548 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 DGKEP52429 567 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 MAP3K7CLP57077 242 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 ORC1Q13415 861 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 PLK5Q496M5 336 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 HSF5Q4G112 596 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 PREPLQ4J6C6 727 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 ZCWPW2Q504Y3 356 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 C2orf27AQ580R0 203 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 LY6G5CQ5SRR4 150 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 KRT39Q6A163 491 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 CLEC20AQ6ZU45 233 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 C11orf74Q86VG3 221 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 TTC39CQ8N584 583 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 TSTD1Q8NFU3 115 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 TAS1R2Q8TE23 839 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 CYFIP2Q96F07 1278 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 NIF3L1Q9GZT8 377 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 NACA2Q9H009 215 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 DUSP15Q9H1R2 295 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 APOBEC3GQ9HC16 384 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 TMEM8AQ9HCN3 771 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 GMIPQ9P107 970 aa13.14□□□□□ -0.31
TRAPPC9-206ENST00000519482 DCDC2BA2VCK2 349 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 STX10O60499 249 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 TLR5O60602 858 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 CILPO75339 1184 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 TRIM49P0CI25 452 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 TRIM49CP0CI26 452 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 BMP6P22004 513 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 ADORA2BP29275 332 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 GRIA2P42262 883 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 TNFRSF4P43489 277 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 SLC6A11P48066 632 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 LIMK1P53667 647 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 SEC13P55735 322 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 FANCCQ00597 558 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 ELF2Q15723 593 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 CRY1Q16526 586 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 USP39Q53GS9 565 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 PLA2G2CQ5R387 149 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 ISM2Q6H9L7 571 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 RASSF3Q86WH2 238 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 CNOT6LQ96LI5 555 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 TWNKQ96RR1 684 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 FAM124BQ9H5Z6 455 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 ARHGEF4Q9NR80 690 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 SCML2Q9UQR0 700 aa13.13□□□□□ -0.31
TRAPPC9-206ENST00000519482 ABCA7Q8IZY2 2146 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 HHLA1C9JL84 531 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 SCAMP3O14828 347 aaKnown RBP13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 CETN3O15182 167 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 HOXC11O43248 304 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 NRDCO43847 1150 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 GDF9O60383 454 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 ALDH1A2O94788 518 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 CD58P19256 250 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 CDK11BP21127 795 aaKnown RBP13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 ATP5C1P36542 298 aaKnown RBP13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 PSEN1P49768 467 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 UBASH3AP57075 661 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 GOLGA8FQ08AF8 430 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 GOLGA8DPQ0D2H9 430 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 AASDHQ4L235 1098 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 ZNF658Q5TYW1 1059 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 BTBD8Q5XKL5 378 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 KLHDC10Q6PID8 442 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 NUDT18Q6ZVK8 323 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 HTR3DQ70Z44 454 aa13.12□□□□□ -0.31
TRAPPC9-206ENST00000519482 C12orf40Q86WS4 652 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms