RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 ATP5C1P36542 298 aaKnown RBP9.92□□□□□ -0.82
CLN8-203ENST00000518780 VAV2P52735 878 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 RBM10P98175 930 aaKnown RBP9.92□□□□□ -0.82
CLN8-203ENST00000518780 NNTQ13423 1086 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 SMAD4Q13485 552 aaKnown RBP9.92□□□□□ -0.82
CLN8-203ENST00000518780 SKIV2LQ15477 1246 aaKnown RBP9.92□□□□□ -0.82
CLN8-203ENST00000518780 IFI16Q16666 785 aaKnown RBP9.92□□□□□ -0.82
CLN8-203ENST00000518780 LEXMQ3ZCV2 418 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 PRSS36Q5K4E3 855 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 PPP1R15BQ5SWA1 713 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 MSANTD2Q6P1R3 559 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 DCUN1D2Q6PH85 259 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 EP400NLQ6ZTU2 488 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 GAREM2Q75VX8 874 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 BHLHA9Q7RTU4 235 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 SCD5Q86SK9 330 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 KIAA1328Q86T90 577 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 TMEM150AQ86TG1 271 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 HS6ST3Q8IZP7 471 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 C12orf76Q8N812 135 aaPredicted RBP9.92□□□□□ -0.82
CLN8-203ENST00000518780 FEZF2Q8TBJ5 459 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 RFFLQ8WZ73 363 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 SUSD6Q92537 303 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 KHSRPQ92945 711 aaKnown RBP eCLIP9.92□□□□□ -0.82
CLN8-203ENST00000518780 NT5C3BQ969T7 300 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 DDX23Q9BUQ8 820 aaKnown RBP9.92□□□□□ -0.82
CLN8-203ENST00000518780 THAP2Q9H0W7 228 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.92□□□□□ -0.82
CLN8-203ENST00000518780 GMIPQ9P107 970 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 STAP1Q9ULZ2 295 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 USTQ9Y2C2 406 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 PAXBP1Q9Y5B6 917 aa9.92□□□□□ -0.82
CLN8-203ENST00000518780 PRRC2BQ5JSZ5 2229 aaKnown RBP9.92□□□□□ -0.82
CLN8-203ENST00000518780 COL4A4P53420 1690 aaPredicted RBP9.92□□□□□ -0.82
CLN8-203ENST00000518780 TRAV19A0A0A6YYK7 116 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 A0A1W2PQH9 124 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 A0A1W2PRU2 124 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 GOLGA6L9A6NEM1 432 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 GOLGA8SH3BPF8 625 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 DPYSL4O14531 572 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 KRT86O43790 486 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 TLR5O60602 858 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 OLFM2O95897 454 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 OAS1P00973 400 aaKnown RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 NCAM1P13591 858 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 RARGP13631 454 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 SDC4P31431 198 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 GBP1P32455 592 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 ARHGAP25P42331 645 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 PTPN9P43378 593 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 ZNF143P52747 638 aaPredicted RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 COG7P83436 770 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 DLX2Q07687 328 aaPredicted RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 IFRD2Q12894 506 aaPredicted RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 CBX2Q14781 532 aaPredicted RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 MTF1Q14872 753 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 CCDC85BQ15834 202 aaPredicted RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 AAK1Q2M2I8 961 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 SLC25A52Q3SY17 297 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 ACBD5Q5T8D3 534 aaPredicted RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 RSRC2Q7L4I2 434 aaKnown RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 OTOP3Q7RTS5 596 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 RNF10Q8N5U6 811 aaKnown RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 MAFAQ8NHW3 353 aaPredicted RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 SHKBP1Q8TBC3 707 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 E2F7Q96AV8 911 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 TRIM44Q96DX7 344 aaPredicted RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 PGAP3Q96FM1 320 aaPredicted RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 SERPINB11Q96P15 392 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 CNPY3Q9BT09 278 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 ZNF334Q9HCZ1 680 aaPredicted RBP9.91□□□□□ -0.82
CLN8-203ENST00000518780 HCFC1R1Q9NWW0 138 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 CTTNBP2NLQ9P2B4 639 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 TJP2Q9UDY2 1190 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 IP6K2Q9UHH9 426 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 DNMT3LQ9UJW3 386 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 MYO9BQ13459 2157 aa9.91□□□□□ -0.82
CLN8-203ENST00000518780 C2CD4BA6NLJ0 364 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 MYO1FO00160 1098 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 PIK3R2O00459 728 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 MOSPD3O75425 235 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 TADA3O75528 432 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 ENDOD1O94919 500 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 ABL1P00519 1130 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 FYNP06241 537 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 SLC2A3P11169 496 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 TCF3P15923 654 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 PDGFRAP16234 1089 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 HDCP19113 662 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 GPD1P21695 349 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 KCNA5P22460 613 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 RFC1P35251 1148 aaPredicted RBP9.9□□□□□ -0.82
CLN8-203ENST00000518780 AVPR1AP37288 418 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 SLC7A9P82251 487 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 RING1Q06587 406 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 PIGHQ14442 188 aaPredicted RBP9.9□□□□□ -0.82
CLN8-203ENST00000518780 C2CD6Q53TS8 623 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 DCAF6Q58WW2 860 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 C10orf120Q5SQS8 335 aa9.9□□□□□ -0.82
CLN8-203ENST00000518780 STRADAQ7RTN6 431 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms